The multiplexed diagnosis of arbovirus infections using combinatorial probes. Viruses that cause serious diseases such as hemorrhagic fever or encephalitis must be quickly identified. Diagnostic tests based on DNA hybridisation are accurate and can be rapid but they are expensive. We will test a method for simplifying DNA tests and increasing their capabilities. DNA probes for detecting arboviruses will be designed at the ANU using new bioinformatic methods and their reliability will be model ....The multiplexed diagnosis of arbovirus infections using combinatorial probes. Viruses that cause serious diseases such as hemorrhagic fever or encephalitis must be quickly identified. Diagnostic tests based on DNA hybridisation are accurate and can be rapid but they are expensive. We will test a method for simplifying DNA tests and increasing their capabilities. DNA probes for detecting arboviruses will be designed at the ANU using new bioinformatic methods and their reliability will be modelled using all the available genetic information. Computer predictions will be experimentally tested in the PANBIO laboratory by using the probes to detect viral nucleic acids. The influence of virus genome complexity will be investigatedRead moreRead less
Special Research Initiatives - Grant ID: SR0354726
Funder
Australian Research Council
Funding Amount
$10,000.00
Summary
NETVISION: AUSTRALIA'S NATIONAL VISION RESEARCH NETWORK. Vision is the most important human sense. Visual malfunctions pose major health challenges. Vision provides a window into the brain, for studying perception, cognition and consciousness. It is integral to human cultural and social development. It provides opportunities for technological advances in diagnostics, artificial vision, robotics, and surveillance. Vision is therefore crucial to three of the National Priority Areas. The National V ....NETVISION: AUSTRALIA'S NATIONAL VISION RESEARCH NETWORK. Vision is the most important human sense. Visual malfunctions pose major health challenges. Vision provides a window into the brain, for studying perception, cognition and consciousness. It is integral to human cultural and social development. It provides opportunities for technological advances in diagnostics, artificial vision, robotics, and surveillance. Vision is therefore crucial to three of the National Priority Areas. The National Vision Network will create a coherent, interactive and innovative research base in the vision sciences, linked to end-users in areas ranging from the art, entertainment and fashion industries, through health and education, to border protection and counter-terrorism.Read moreRead less
Enhancing plant photosynthesis by engineering the carbon dioxide (CO2)-fixing enzyme Rubisco. Improving the ability of crops to use water, sunlight and fertiliser more efficiently would have economic benefits for Australia and ease the environmental impacts associated with agricultural practices. Photosynthesis research has confirmed that such improvements are theoretically possible by enhancing the efficiency of the protein, Rubisco, which initiates the conversion of carbon dioxide into carbon ....Enhancing plant photosynthesis by engineering the carbon dioxide (CO2)-fixing enzyme Rubisco. Improving the ability of crops to use water, sunlight and fertiliser more efficiently would have economic benefits for Australia and ease the environmental impacts associated with agricultural practices. Photosynthesis research has confirmed that such improvements are theoretically possible by enhancing the efficiency of the protein, Rubisco, which initiates the conversion of carbon dioxide into carbon compounds required for growth. The biotechnological research proposed here uses unique capabilities to improve our understanding of structural features in Rubisco that influence its assembly and functional efficiency in plants. This knowledge will pave the way for transplanting more efficient Rubisco into crops to improve their growth.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0989564
Funder
Australian Research Council
Funding Amount
$150,000.00
Summary
State-of-the-art facility for human and animal virus research in the Canberra and surrounding regions. New viral diseases continue to emerge and old viruses re-emerge to pose a threat to human and animal health. To combat these, we propose a dedicated viral disease research facility. The centre will include experienced researchers, biotechnology companies and government agencies working on discovery, prevention and treatment of viral diseases. Forging strong scientific links between these organi ....State-of-the-art facility for human and animal virus research in the Canberra and surrounding regions. New viral diseases continue to emerge and old viruses re-emerge to pose a threat to human and animal health. To combat these, we propose a dedicated viral disease research facility. The centre will include experienced researchers, biotechnology companies and government agencies working on discovery, prevention and treatment of viral diseases. Forging strong scientific links between these organisations will considerably enhance the productivity of these researchers, increase their collaborative and scientific outputs and allow for training of students in the latest technologies. The facility will provide researchers with cutting-edge instrumentation for nationally and internationally important projects that would benefit human health.Read moreRead less
ARC Centre of Excellence - Vision Science. This Centre will generate important new knowledge of the performance, logic and stability of vision and visual behaviour. This knowledge will help reduce the burden of vision impairment in Australia, increasing productivity, promoting healthy ageing and reducing the community costs of visual impairment (ca. $9.85 billion in 2004). The knowledge produced will also make possible world-class innovations in robotics, leading to novel automated vision system ....ARC Centre of Excellence - Vision Science. This Centre will generate important new knowledge of the performance, logic and stability of vision and visual behaviour. This knowledge will help reduce the burden of vision impairment in Australia, increasing productivity, promoting healthy ageing and reducing the community costs of visual impairment (ca. $9.85 billion in 2004). The knowledge produced will also make possible world-class innovations in robotics, leading to novel automated vision systems with applications in industry and national security. Other knowledge will develop novel diagnostic technologies, for application in health delivery.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0989861
Funder
Australian Research Council
Funding Amount
$650,000.00
Summary
Electron Microscopes for Nanometer-Scale Imaging/Microanalysis in the Materials, Biological, Physical, Engineering and Chemical Sciences. Electron microscopes have contributed to many of the most significant discoveries and technological advances of the last 6 decades. High resolution transmission and scanning electron microscopes have become essential research infrastructure in internationally competitive materials science, biology, bio-medical science, physics, chemistry and a broad range of e ....Electron Microscopes for Nanometer-Scale Imaging/Microanalysis in the Materials, Biological, Physical, Engineering and Chemical Sciences. Electron microscopes have contributed to many of the most significant discoveries and technological advances of the last 6 decades. High resolution transmission and scanning electron microscopes have become essential research infrastructure in internationally competitive materials science, biology, bio-medical science, physics, chemistry and a broad range of engineering disciplines. This capability is not currently available in the Newcastle, Hunter, Central and Lower North Coast and New England regions. This proposal is aimed at satisfying the considerable demand for high resolution microscopy in these areas leading to high quality research outcomes across 3 National Research Priorities and a strong contribution to research training.Read moreRead less
New Methods for Directed Molecular Evolution of Novel Protein Functions. Novel ribosome-based techniques can be used to carry out test-tube evolution of proteins with new structures and functions. The methods rely on (a) physical association of individual nucleic acid molecules with the particular protein molecules they encode, (b) selection of proteins with new functions, and (c) recovery of the attached genetic code. This project will address several issues that currently limit use of these fr ....New Methods for Directed Molecular Evolution of Novel Protein Functions. Novel ribosome-based techniques can be used to carry out test-tube evolution of proteins with new structures and functions. The methods rely on (a) physical association of individual nucleic acid molecules with the particular protein molecules they encode, (b) selection of proteins with new functions, and (c) recovery of the attached genetic code. This project will address several issues that currently limit use of these frontier technologies for evolution of new protein products that have a wide range of practical applications.Read moreRead less
Exploring The Occurrence And Potential Associated Risk Factors For Pilchard Orthomyxovirus (POMV) In Tasmanian Farmed Atlantic Salmon
Funder
Fisheries Research and Development Corporation
Funding Amount
$209,295.62
Summary
Following basic epidemiology principles, no infectious disease occurs ‘randomly’ and its occurrence follow logical and predictable patterns. The presence of an infectious agent is unlikely sufficient to explain these patterns and most aquatic diseases result from the complex interaction between the agent, the host and its environment. Therefore, the targeted outcome for a POMV control plan is threefold: 1. Decrease transmission between infected and susceptible fish groups – this requires ide ....Following basic epidemiology principles, no infectious disease occurs ‘randomly’ and its occurrence follow logical and predictable patterns. The presence of an infectious agent is unlikely sufficient to explain these patterns and most aquatic diseases result from the complex interaction between the agent, the host and its environment. Therefore, the targeted outcome for a POMV control plan is threefold: 1. Decrease transmission between infected and susceptible fish groups – this requires identifying risk factors associated with the introduction, spread, and maintenance of the pathogen within the industry; 2. Decrease the number of susceptible fish – this mainly requires identifying risk factors associated with the susceptibility of the host (e.g. husbandry-related stress) and the development of a safe and effective prophylaxis; 3. Decrease the amount of virus in the environment - this requires detecting infected fish cage(s) early to implement timely control strategies. Diagnostic capacity to confirmed POMV outbreak has been developed and is currently used in routine by the industry. A vaccine against POMV is currently under development at the Tasmanian Aquatic Animal Health and Vaccines Centre of Excellence and will be available in the future. However, little is known about risk factors specific to POMV and about its full economic impact. We define as a ‘risk factor’ any attribute of the agent, the host or its environment that increases the risk and intensity of a disease outbreak. Most of the environmental risk factors (including farming practices) facilitate the introduction, transmission, or maintenance of the pathogen; while the host risk factors affect the susceptibility of the host and its capacity to become diseased. Like the closely related ISAv, the magnitude and occurrence of POMV outbreaks appeared to be highly variable. This supports the existence of additional factors other than the POMV infection that contribute to the intensity of an outbreak. It is anticipated that by identifying and intervening on some of the manageable risk factors, the frequency and the severity of POMV outbreaks can be reduced. Objectives: 1. Describe the occurrence of POMV outbreaks in the Tasmanian salmon industry 2. Quantify the direct financial impact of POMV mortality to the Tasmanian salmon industry 3. Identify potential management, environmental and stock risk factors directly or indirectly increasing the risk and intensity of a POMV outbreaks Read moreRead less
Viral Endemiology Of Selected Australian Commercial Fish Species And Their Susceptibility To Viral Diseases
Funder
Fisheries Research and Development Corporation
Summary
Objectives: 1. Expand the Australian viral endemiology testing facility to include certified continuous cell lines derived from commercially important Australian fish species, 2. enabling the viral endemiology and susceptibility of these fish to be studied
Atlantic Salmon Aquaculture Subprogram: Molecular Genetic Tools For The Tasmanian Atlantic Salmon Industry – Development And Application
Funder
Fisheries Research and Development Corporation
Funding Amount
$461,796.00
Summary
The efficiency and effectiveness of selective breeding programs can be greatly enhanced through the use of DNA technology. The application of such technology will be used for pedigree information and identification of markers for economic traits leading to marker-assisted selection. Although various international laboratories and CSIRO have developed a bank of molecular markers for Atlantic salmon, the potential of these and other nuclear DNA markers such as AFLPs need evaluating.
Throu ....The efficiency and effectiveness of selective breeding programs can be greatly enhanced through the use of DNA technology. The application of such technology will be used for pedigree information and identification of markers for economic traits leading to marker-assisted selection. Although various international laboratories and CSIRO have developed a bank of molecular markers for Atlantic salmon, the potential of these and other nuclear DNA markers such as AFLPs need evaluating.
Through this project we would be able to formally collaborate on an international mapping project for salmonids. This would give the local industry access to far more markers and genetic information than would be possible if we worked in isolation.
The extent of genetic variation within the Tasmanian population with respect to overseas endemic populations remains unclear. In time it may be considered advantageous to import new genetic material to enhance various characteristics of the local population. However, at present that is unlikely and the genetic status of the population, and of the effectiveness of breeding protocols, needs to be better understood. Significant progress was made with this and the search for sex differences (project 96/347), but funding is required to further the research. Objectives: 1. To further develop and apply molecular markers for use in industry breeding programs. 2. To genotype selected broodstock with a suite of microsatellite markers to enable efficient pedigree analysis of progeny. 3. To compare microsatellite DNA variation from archival scale samples from the progenitor Canadian population with past and current cohorts of the Tasmanian population. Read moreRead less