Programming Paradigms, Tools and Algorithms for Electronic Structure Calculations on Clusters of Non-Uniform Memory Access Parallel Processors. In recent years Australian academia has invested heavily in high performance computing systems. A significant fraction of these resources are devoted to performing computational chemistry studies, such as those used in drug design. This project links Australian researchers with the company responsible for a particularly widely used computational chemistr ....Programming Paradigms, Tools and Algorithms for Electronic Structure Calculations on Clusters of Non-Uniform Memory Access Parallel Processors. In recent years Australian academia has invested heavily in high performance computing systems. A significant fraction of these resources are devoted to performing computational chemistry studies, such as those used in drug design. This project links Australian researchers with the company responsible for a particularly widely used computational chemistry application package, and also with a major international computer company. Our aim is to substantially improve the performance of this code on cluster based compute systems. This, as well as our generic performance evaluation tools, would be of substantial benefit to the Australian research community. The project will forge links with researchers in Singapore, Japan and the USA.Read moreRead less
Programming Paradigms, Tools and Algorithms for the Spectral Solution of the Electronic Schroedinger Equation on Non-Uniform Memory Parallel Processors. We propose to develop software tools and methods that are appropriate for current and future generations of large scale shared memory computer systems. Our purpose is to enable a more productive utilization of these architectures for scientific computation. We will focus on algorithms for solving differential equations appropriate to quantum che ....Programming Paradigms, Tools and Algorithms for the Spectral Solution of the Electronic Schroedinger Equation on Non-Uniform Memory Parallel Processors. We propose to develop software tools and methods that are appropriate for current and future generations of large scale shared memory computer systems. Our purpose is to enable a more productive utilization of these architectures for scientific computation. We will focus on algorithms for solving differential equations appropriate to quantum chemistry. In particular an exciting new class of methods whose computational cost scales linearly with system size. Our goal is to develop scalable parallel implementations of these methods. If realized this will revolutionize computation, enabling first principles calculations on truly nanoscale systems, such as enzymes and molecular electronic devices.Read moreRead less
Dynamic Cooperative Performance Optimizations. This project seeks to improve the reliability, security, and
performance of modern software systems. Security is a problem of such
scale that outbreaks of computer viruses etc. headline in major
financial newspapers. We approach the problem by addressing the key
performance problems that hold back the programming languagues widely
used for secure and reliable systems. By improving the reliability,
security and performance of computer system ....Dynamic Cooperative Performance Optimizations. This project seeks to improve the reliability, security, and
performance of modern software systems. Security is a problem of such
scale that outbreaks of computer viruses etc. headline in major
financial newspapers. We approach the problem by addressing the key
performance problems that hold back the programming languagues widely
used for secure and reliable systems. By improving the reliability,
security and performance of computer systems, this project will help
alleviate the millions of hours and dollars lost to inadvertent errors
and malicious software attacks. The project will give Australia an
international presence in a research area of great academic and
commercial importance.Read moreRead less
Lightweight security solutions for wearable healthcare sensor devices. The aim of this project is to develop new methods to secure the data and context associated with body-wearable health monitoring devices. The novelty of the scheme is in making the methods work on resource-poor devices, by combining new security capabilities derived from the operating environment with conventional cryptographic techniques. This project aims to increase the trust that medical practitioners and insurance provid ....Lightweight security solutions for wearable healthcare sensor devices. The aim of this project is to develop new methods to secure the data and context associated with body-wearable health monitoring devices. The novelty of the scheme is in making the methods work on resource-poor devices, by combining new security capabilities derived from the operating environment with conventional cryptographic techniques. This project aims to increase the trust that medical practitioners and insurance providers can place on health data from wearable devices, and showcase Australian innovation in developing world-class security solutions. The outcome of this project is expected to be the development and demonstration of ultra-lightweight algorithms and mechanisms that execute in wearable devices to safeguard the integrity of the data.Read moreRead less
Improving Modern Programming Language Performance: A Memory-Conscious Approach. The performance of modern programming languages such as Java and C# lags that of imperative languages such as C and Fortran. A significant source of the performance gap is poor memory behavior, which future computer architectures will exacerbate. This project addresses the problem of poor memory behavior in modern programming languages such as Java and C# through an integrated attack that incorporates new garbage c ....Improving Modern Programming Language Performance: A Memory-Conscious Approach. The performance of modern programming languages such as Java and C# lags that of imperative languages such as C and Fortran. A significant source of the performance gap is poor memory behavior, which future computer architectures will exacerbate. This project addresses the problem of poor memory behavior in modern programming languages such as Java and C# through an integrated attack that incorporates new garbage collection algorithms, run-time techniques that optimize running programs, and new compiler analyses with both static and dynamic optimizations. The project will give Australia an
international presence in a research area of great academic and commercial importance.
Read moreRead less
Visual Analytics for Next Generation Sequencing. Next-generation sequencing technologies have brought a revolution in biology and healthcare, while taxing the ability of scientists and clinicians to identify and process relevant data, to make sense of it all and communicate it to others in a concise and meaningful way. This project aims to tackle this problem through fundamentally new approaches to data selection and visualisation at very large scale, actively encoding for insight into underlyin ....Visual Analytics for Next Generation Sequencing. Next-generation sequencing technologies have brought a revolution in biology and healthcare, while taxing the ability of scientists and clinicians to identify and process relevant data, to make sense of it all and communicate it to others in a concise and meaningful way. This project aims to tackle this problem through fundamentally new approaches to data selection and visualisation at very large scale, actively encoding for insight into underlying biological and biomedical processes, bringing sustainable discovery of new relationships and variations within the data. The project aims to support new approaches to medical diagnosis and treatment, and offer crucial lessons to address the broader challenge of understanding large, complex data sets.Read moreRead less
Finding and exploiting interesting paths in multidimensional information spaces. This project will invent a new approach for searching within a large complex information space, finding interesting paths between points within the space, visualising the results, and supporting rich, human-centric user interaction with queries and results. This project will embody these techniques in a novel, internet-scale framework to support rapid development of large path search and visualisation applications. ....Finding and exploiting interesting paths in multidimensional information spaces. This project will invent a new approach for searching within a large complex information space, finding interesting paths between points within the space, visualising the results, and supporting rich, human-centric user interaction with queries and results. This project will embody these techniques in a novel, internet-scale framework to support rapid development of large path search and visualisation applications. Evaluation will be via development of several exemplar applications. The techniques and framework will be applicable to a broad range of economically important problems in areas as diverse as health, travel, scientific publication search, product marketing and software engineering.Read moreRead less