TSuNAMi: Time Series Network Animal Modelling. Our proposal is motivated by and based upon the successful representation of time series as a network (or graph). We construct an abstract representation of a system from measurements of its changing behaviour over time. Properties of that structure (the network) then allow us to infer diagnostic information of the system. Specifically, we propose to apply this to livestock welfare during transport. By measuring the biological and environment condi ....TSuNAMi: Time Series Network Animal Modelling. Our proposal is motivated by and based upon the successful representation of time series as a network (or graph). We construct an abstract representation of a system from measurements of its changing behaviour over time. Properties of that structure (the network) then allow us to infer diagnostic information of the system. Specifically, we propose to apply this to livestock welfare during transport. By measuring the biological and environment condition of the animal we construct a network representation of that system. Geometric features of that network can then be used to infer health or duress of the subject. This proposal will develop the generic mathematical machinery to connect geometric features of the network with system behaviour. Read moreRead less
Large-Scale Multi-Omic Analysis And Risk Prediction Of Complex Human Disease
Funder
National Health and Medical Research Council
Funding Amount
$321,414.00
Summary
A major aim of medicine is to prevent disease, which is often more successful and cost-effective than treating an already existing condition. Common diseases, such as autoimmune and cardiovascular diseases, have a predisposing genetic basis. We will conduct genetic analysis of large datasets of coeliac disease and cardiovascular disease to better identify individuals at increased risk and to better understand the underlying biological processes through which genetics act to affect one's risk.
High-resolution multiscale modelling of pandemics: COVID-19 and beyond. The project aims to develop high-resolution computational models for pandemic mitigation and control, focussing on the novel coronavirus and its emerging variants, and leveraging demographic, genomic and epidemiological data. It expects to rigorously compare multi-scale effects of complex vaccination and social distancing strategies and quantify optimal responses under the COVID-19 induced uncertainty. The intended outcomes ....High-resolution multiscale modelling of pandemics: COVID-19 and beyond. The project aims to develop high-resolution computational models for pandemic mitigation and control, focussing on the novel coronavirus and its emerging variants, and leveraging demographic, genomic and epidemiological data. It expects to rigorously compare multi-scale effects of complex vaccination and social distancing strategies and quantify optimal responses under the COVID-19 induced uncertainty. The intended outcomes include computational models of how the most infectious viral variants emerge and spread in presence of interventions, how to predict the outbreaks, and which are the most vulnerable communities. This should make a significant economic and social impact, improving population health while maintaining a resilient economy.Read moreRead less
A study of the archaeology of Caucasian Iberia with implications for grazing management in Australia. This multi-disciplinary project will promote a younger generation of talented postgraduate and undergraduate students in a wide variety of fields, including archaeology, geomatic engineering, conservation of material culture, environmental and other natural sciences. The highlands of the Caucasus, located in a bioclimatic zone with a long history of alpine grazing, can also provide answers to qu ....A study of the archaeology of Caucasian Iberia with implications for grazing management in Australia. This multi-disciplinary project will promote a younger generation of talented postgraduate and undergraduate students in a wide variety of fields, including archaeology, geomatic engineering, conservation of material culture, environmental and other natural sciences. The highlands of the Caucasus, located in a bioclimatic zone with a long history of alpine grazing, can also provide answers to questions such as the effect of grazing on biodiversity and the rehabilitation of fragile ecosystems, which may inform management and conservation activities in analogous highland country in Australia. The project will also ensure that exhibitions illustrating the rich heritage of Caucasus will reach Australian shores.Read moreRead less
Propagating Neural Waves: Combined Experimental and Modelling Study. The project is designed to measure propagating neural waves in visual areas of the brain to discover why and how they are created, how they interact with sensory inputs, and whether they can support brain plasticity and learning. Recent analysis of the brain’s electrical signals has showed that nerve cell activity is often organised into propagating waves, but how these waves are created, and what role they play in brain inform ....Propagating Neural Waves: Combined Experimental and Modelling Study. The project is designed to measure propagating neural waves in visual areas of the brain to discover why and how they are created, how they interact with sensory inputs, and whether they can support brain plasticity and learning. Recent analysis of the brain’s electrical signals has showed that nerve cell activity is often organised into propagating waves, but how these waves are created, and what role they play in brain information processing, remains unknown. The project plans to develop new methods for processing large-scale neural data, and to apply these methods to learn about propagating neural waves. These results may improve our understanding of how neural circuits function, eventually leading to clinical and technological advances.Read moreRead less
Complex dynamical systems: inferring form and function of interacting biological systems. Often in biology a large number of simple parts interacting according to simple rules can result in behaviour that is rich and varied. This project aims to develop the mathematics of complex systems theory to describe how such collections of simple interacting parts can form large complicated structures, and to deduce what dynamical behaviour can result.
Discovery Early Career Researcher Award - Grant ID: DE140100620
Funder
Australian Research Council
Funding Amount
$395,220.00
Summary
Inference, control and protection of interdependent spatial networked structures. Networked structures are everywhere and modern societies largely depend on their proper functioning. Some of these networks are spatial with each node having a geographical tag. Examples include power grids, the internet and transportation networks. These networks are often interdependent where their functioning depends on each other. This project will establish a mathematical framework to efficiently observe and c ....Inference, control and protection of interdependent spatial networked structures. Networked structures are everywhere and modern societies largely depend on their proper functioning. Some of these networks are spatial with each node having a geographical tag. Examples include power grids, the internet and transportation networks. These networks are often interdependent where their functioning depends on each other. This project will establish a mathematical framework to efficiently observe and control interdependent spatial networks and develop design strategies in order to maximise residency of spatial networks against catastrophic failures in their components. The outcomes of the project will protect the Australian power grid and transportation networks against random and intentional failures. Read moreRead less
Metaphotonics and metasurfaces for disruptive sensing technologies. This project aims to address a big challenge in nanophotonics by developing revolutionary methods for efficient chiral sensing of molecules without the need for spectrometry, frequency scanning, or moving mechanical parts, and to enhance chiroptical signals a hundredfold with the help of metasurface structures. Resonant metasurfaces are arrays of engineered dielectric nanoparticles with extraordinary characteristics, and they wo ....Metaphotonics and metasurfaces for disruptive sensing technologies. This project aims to address a big challenge in nanophotonics by developing revolutionary methods for efficient chiral sensing of molecules without the need for spectrometry, frequency scanning, or moving mechanical parts, and to enhance chiroptical signals a hundredfold with the help of metasurface structures. Resonant metasurfaces are arrays of engineered dielectric nanoparticles with extraordinary characteristics, and they would allow to overcome current limitations of chiral sensing analytical tools. Detecting chiral molecules in low concentrations is crucially important to many fields of biology, chemistry, and pharmacy, as well as to the food and cosmetics industries, constituting a market of tens of billions of dollars.Read moreRead less
Mapping EQTL To Dissect The Genetic Basis Of Complex Trait Variation
Funder
National Health and Medical Research Council
Funding Amount
$719,525.00
Summary
People vary in traits such as height and blood pressure and in their susceptibility to common disease. Part of these differences between individuals is because of their genetic make-up. This research is about understanding which of the genes are involved in common variation and how they work. In particular, the researchers investigate if variation in DNA sequence causes genes to be expressed more or less and how gene expression affects risk of disease.
Quantifying emergence and dynamics of foodborne epidemics in Australia. The project aims to greatly improve the accuracy and scope of computational epidemiological models predicting emergence and evolution of foodborne diseases in Australia. It expects to reveal key pathways for both biological evolution of microorganisms, and their spread though food supply chains and human interactions. The intended outcomes include discovering how the most dominant strains of foodborne infection emerge and se ....Quantifying emergence and dynamics of foodborne epidemics in Australia. The project aims to greatly improve the accuracy and scope of computational epidemiological models predicting emergence and evolution of foodborne diseases in Australia. It expects to reveal key pathways for both biological evolution of microorganisms, and their spread though food supply chains and human interactions. The intended outcomes include discovering how the most dominant strains of foodborne infection emerge and self-organise in complex networks, how to predict and contain the epidemics closer to their source, and which are the most vulnerable groups and communities. This should make a significant economic and social impact, improving health of the population, while also safeguarding national and international supply chains.Read moreRead less