Macrophage proteins: structure, function and e-science. The human genome was published five years ago, yet the functions of only a small fraction of the tens of thousands of encoded proteins are known. The development of smarter and faster methods for elucidating the structure and function of uncharacterised proteins is vital to a knowledge-based economy and a healthy society. The long-term benefits to the community will include fundamental new knowledge, generation of new pharmaceuticals and th ....Macrophage proteins: structure, function and e-science. The human genome was published five years ago, yet the functions of only a small fraction of the tens of thousands of encoded proteins are known. The development of smarter and faster methods for elucidating the structure and function of uncharacterised proteins is vital to a knowledge-based economy and a healthy society. The long-term benefits to the community will include fundamental new knowledge, generation of new pharmaceuticals and the development of new eScience approaches to streamline costs and efforts of research and to make science more accessible to the public.Read moreRead less
Structure and function of novel transporters in alphaproteobacteria. First, detailed knowledge of a set of membrane transporters and the way their activity might be inhibited, will have implications for the treatment of human disease. Second, excellent outcomes are provided for the training of postgraduate students and research staff. This project entails cutting edge technology, and the transfer of technical capabilities not currently available in Australia. Third, our studies on non-pathogenic ....Structure and function of novel transporters in alphaproteobacteria. First, detailed knowledge of a set of membrane transporters and the way their activity might be inhibited, will have implications for the treatment of human disease. Second, excellent outcomes are provided for the training of postgraduate students and research staff. This project entails cutting edge technology, and the transfer of technical capabilities not currently available in Australia. Third, our studies on non-pathogenic species of alpha-proteobacteria provides for a timely advance in our knowledge of their biology: other species of alpha-proteobacteria were amongst the first organisms trialled for biological weapons by the USA and the former Soviet Union, and those pathogenic species are rated as Class 3 organisms.Read moreRead less
Force-from-lipids biophysical principle underlying mechanotransduction. The major aim of this project is to determine evolutionary conserved physical principles of mechanotransduction in living cells through structure and function studies of PIEZO mechanoreceptor channels playing a crucial role in senses such as touch and pain in animals and humans. Mutations in these channels can cause numerous genetic disorders, including hereditary anaemias and joint contractures. Since they have been shown t ....Force-from-lipids biophysical principle underlying mechanotransduction. The major aim of this project is to determine evolutionary conserved physical principles of mechanotransduction in living cells through structure and function studies of PIEZO mechanoreceptor channels playing a crucial role in senses such as touch and pain in animals and humans. Mutations in these channels can cause numerous genetic disorders, including hereditary anaemias and joint contractures. Since they have been shown to respond to mechanical stimuli in the same manner as mechanoreceptor channels of organisms from bacteria to humans the intended outcome of this project is to uncover the unifying principles of mechanotransduction anchored in the laws of physics and chemistry that have guided the force-dependent design of all life forms.Read moreRead less
Molecular machines that drive microbial pathogens. We will provide a comprehensive understanding of molecular machines situated at the surface of bacteria. This ground-breaking research will provide excellent outcomes in the training of research students and staff: this project entails frontier technology, and the transfer of technological capabilities not currently available in Australia. Our study on a non-pathogenic species of bacteria is timely too for National security: related species of b ....Molecular machines that drive microbial pathogens. We will provide a comprehensive understanding of molecular machines situated at the surface of bacteria. This ground-breaking research will provide excellent outcomes in the training of research students and staff: this project entails frontier technology, and the transfer of technological capabilities not currently available in Australia. Our study on a non-pathogenic species of bacteria is timely too for National security: related species of bacteria were amongst the first organisms trialed as biological weapons, and the pathogenic species remain rated as Class 3 organisms by the Centers for Disease Control.Read moreRead less
Mitochondrial biogenesis: the evolution of molecular machines. Benefits from this research program fall into two discrete types. Firstly, excellent outcomes are provided for the training of postgraduate students and research staff. This project entails cutting edge technology, and the development of skills not common in Australia. Secondly, detailed knowledge will be gained of molecular machines and the way in which they may differ in human cells and in the cells of human cell parasites, with im ....Mitochondrial biogenesis: the evolution of molecular machines. Benefits from this research program fall into two discrete types. Firstly, excellent outcomes are provided for the training of postgraduate students and research staff. This project entails cutting edge technology, and the development of skills not common in Australia. Secondly, detailed knowledge will be gained of molecular machines and the way in which they may differ in human cells and in the cells of human cell parasites, with implications for the treatment of human disease.Read moreRead less
Reducible complexity in the molecular machines of humans and bacteria. Firstly, we will provide detailed knowledge of the surface membrane proteins of an important class of bacteria, the alpha-proteobacteria. Secondly, excellent outcomes are provided for the training of postgraduate students and research staff: this project entails frontier technology, and the transfer of technological capabilities not currently available in Australia. Thirdly, our studies on non-pathogenic species of alpha-prot ....Reducible complexity in the molecular machines of humans and bacteria. Firstly, we will provide detailed knowledge of the surface membrane proteins of an important class of bacteria, the alpha-proteobacteria. Secondly, excellent outcomes are provided for the training of postgraduate students and research staff: this project entails frontier technology, and the transfer of technological capabilities not currently available in Australia. Thirdly, our studies on non-pathogenic species of alpha-proteobacteria is timely for National security: species of alpha-proteobacteria were amongst the first organisms trialled as biological weapons by the USA and the former Soviet Union, and these pathogenic species remain rated as Class 3 organisms by the Centers for Disease Control. Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0775673
Funder
Australian Research Council
Funding Amount
$1,200,000.00
Summary
A high throughput protein crystallization & imaging facility. Protein crystallography is an important field of research that enables us to understand the precise shape of proteins. The precise shape of a protein determines the function of a protein. This information is essential in understanding the physiological role of a protein and may be used for the development of therapeutics, where approrpiate. We aim to develop a high-throughput robotics system that will enable us to determine the sh ....A high throughput protein crystallization & imaging facility. Protein crystallography is an important field of research that enables us to understand the precise shape of proteins. The precise shape of a protein determines the function of a protein. This information is essential in understanding the physiological role of a protein and may be used for the development of therapeutics, where approrpiate. We aim to develop a high-throughput robotics system that will enable us to determine the shape of many proteins more rapidly, thereby greatly accelerating the pace of biomedical research.Read moreRead less
Complexities of the mitochondrial transcriptome. This project aims to understand mitochondrial gene expression and energy production. Energy production is important for living things to grow and develop. In mammals, the mitochondria, the energy producing “powerhouses of the cell”, contain their own genetic assembly instructions. This project aims to understand these genetic instructions, revealing how genes control energy production. This project will characterise the genetic instructions, the m ....Complexities of the mitochondrial transcriptome. This project aims to understand mitochondrial gene expression and energy production. Energy production is important for living things to grow and develop. In mammals, the mitochondria, the energy producing “powerhouses of the cell”, contain their own genetic assembly instructions. This project aims to understand these genetic instructions, revealing how genes control energy production. This project will characterise the genetic instructions, the mitochondrial transcriptome and the proteins that control them. These advances are expected to provide a mechanistic understanding of how gene expression responds to changes in cellular energy demands. This knowledge will generate new biotechnological tools for Australian science and will have important long-term implications for improving agriculture and medicineRead moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0882979
Funder
Australian Research Council
Funding Amount
$400,000.00
Summary
Australian High Performance Computational Structural Biology Facility. This work will have major outcomes for structural biology research at a national and international level. For structure determination, the ability to perform massively parallel calculations will afford a timesaving of weeks to months. Further, significant insights will be gained into the use of high-performance grid computing in protein structure determination by X-ray crystallography. This knowledge has considerable impact ....Australian High Performance Computational Structural Biology Facility. This work will have major outcomes for structural biology research at a national and international level. For structure determination, the ability to perform massively parallel calculations will afford a timesaving of weeks to months. Further, significant insights will be gained into the use of high-performance grid computing in protein structure determination by X-ray crystallography. This knowledge has considerable impact on our ability to undertake high quality structural biology research - a key area in the majority of biological research programs. Software developed will be made available to academic researchers free of charge.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE170100759
Funder
Australian Research Council
Funding Amount
$372,000.00
Summary
Trans-omic networks: A machine learning and omics integration approach. This project aims to map and model ‘trans-omic’ networks that cut through omic layers using machine learning and multi-omic data integration. Global networks regulated by molecular programs, including signalling, epigenetic, transcriptional and translational regulation, orchestrate cellular functions. Technological advances can profile these molecular programmes, giving rise to various ‘omics’. However, data generated from e ....Trans-omic networks: A machine learning and omics integration approach. This project aims to map and model ‘trans-omic’ networks that cut through omic layers using machine learning and multi-omic data integration. Global networks regulated by molecular programs, including signalling, epigenetic, transcriptional and translational regulation, orchestrate cellular functions. Technological advances can profile these molecular programmes, giving rise to various ‘omics’. However, data generated from each omic layer are predominantly analysed separately owing to their heterogeneity. To understand cellular functions in its entirety, it is essential to interpret omic data across multiple omic layers. Applying this project’s methods is expected to improve use of omics data and fundamental molecular programs.Read moreRead less