Using phylogenomics to record the impacts of climate change, extinction and population fragmentation. This project will use ancient DNA from permafrost-preserved Steppe bison bones and bovid exome capture systems to build a detailed record of the genomic impacts of rapid climate and environmental change at the end of the Pleistocene (30 to 11 kyr). The project will analyse how ancestral genetic diversity is distributed amongst surviving bison populations, and the role of nuclear loci under selec ....Using phylogenomics to record the impacts of climate change, extinction and population fragmentation. This project will use ancient DNA from permafrost-preserved Steppe bison bones and bovid exome capture systems to build a detailed record of the genomic impacts of rapid climate and environmental change at the end of the Pleistocene (30 to 11 kyr). The project will analyse how ancestral genetic diversity is distributed amongst surviving bison populations, and the role of nuclear loci under selection and drift. It will create a novel temporal dataset of genomic adaptation and evolution, and will generate critical data for studies of evolutionary processes such as extinctions, speciation and conservation biology and management.Read moreRead less
Do hotter and drier regions harbour adaptive variation for climate change? This project aims to improve our understanding of the capacity of trees to respond to climate change. This is essential for the maintenance of biodiversity, forest health and productivity. In south-west Australia, climate variation has increased the frequency and intensity of droughts, which has resulted in tree death and negatively affected essential ecosystem services. Adaptive land management is urgently needed to miti ....Do hotter and drier regions harbour adaptive variation for climate change? This project aims to improve our understanding of the capacity of trees to respond to climate change. This is essential for the maintenance of biodiversity, forest health and productivity. In south-west Australia, climate variation has increased the frequency and intensity of droughts, which has resulted in tree death and negatively affected essential ecosystem services. Adaptive land management is urgently needed to mitigate the risk of large-scale drought mortality in a rapidly changing climate. This project seeks to deliver a scientific basis for the adoption of assisted gene migration in south-west forests, through a detailed understanding of genetic adaptation and physiological tolerance, to improve drought-resilience under future hotter and drier climates.Read moreRead less
Transitions between modes of sex-determination in a changing world. Sex-determination controls the largest variation within animals—the division into males and females. While the different systems of sex-determination—involving genetic or environmental control—are fairly well understood, transitions between these systems remain enigmatic in evolutionary biology. This project aims to address this gap by revealing the molecular change required to transition between systems, using one of only two k ....Transitions between modes of sex-determination in a changing world. Sex-determination controls the largest variation within animals—the division into males and females. While the different systems of sex-determination—involving genetic or environmental control—are fairly well understood, transitions between these systems remain enigmatic in evolutionary biology. This project aims to address this gap by revealing the molecular change required to transition between systems, using one of only two known lizard species exhibiting both genetic and temperature control of sex. This knowledge will have important implications for species conservation, facilitating predictions of highly biased sex ratios under climate change, plus potential commercial applications for species where production of one sex is favoured.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190100483
Funder
Australian Research Council
Funding Amount
$410,176.00
Summary
The effect of apparent stabilising selection on genetic architecture. This project aims to improve our understanding of the cause of evolutionary limits. It will test the prediction that trait combinations with high genetic variation are highly correlated with other traits, and therefore are more evolutionary limited than they appear. This project will develop and implement novel evolutionary and statistical manipulations and methods to test this prediction, and is expected to provide new method ....The effect of apparent stabilising selection on genetic architecture. This project aims to improve our understanding of the cause of evolutionary limits. It will test the prediction that trait combinations with high genetic variation are highly correlated with other traits, and therefore are more evolutionary limited than they appear. This project will develop and implement novel evolutionary and statistical manipulations and methods to test this prediction, and is expected to provide new methods for the study of selection. A better understanding of evolutionary limits will provide a significant benefit, enabling better predictions of how natural populations will evolve over short and long time-scales, and their risks of extinction.Read moreRead less
Genetics of species differentiation and hybridisation in Eucalyptus. This project aims to use state-of-the-art genomic technologies to characterise genes and genomic regions important for speciation and adaptation in Australia’s iconic eucalypts, and study the importance of hybridisation between species, especially during range expansion and contraction. A major international effort has seen a eucalypt become the second forest tree genome sequenced. This project aims to link the expanding intern ....Genetics of species differentiation and hybridisation in Eucalyptus. This project aims to use state-of-the-art genomic technologies to characterise genes and genomic regions important for speciation and adaptation in Australia’s iconic eucalypts, and study the importance of hybridisation between species, especially during range expansion and contraction. A major international effort has seen a eucalypt become the second forest tree genome sequenced. This project aims to link the expanding international knowledge on the eucalypt genome to the evolutionary dynamics of wild populations in Australia to provide unprecedented insights into the nature of species and processes which have shaped their evolution. These insights may inform their breeding as well as their conservation and management in Australia.Read moreRead less
Evaluating the adaptive potential of organisms to respond to environmental change. The program utilizes technological advances to develop a gene inventory for climatic change adaptation, using, as model system, the vinegar fly from divergent climates along eastern Australia. The inventory will result in new methods for monitoring climatic change impact on populations, and for testing adaptive potential of organisms from threatened habitats. A key hypothesis is that these organisms have restricte ....Evaluating the adaptive potential of organisms to respond to environmental change. The program utilizes technological advances to develop a gene inventory for climatic change adaptation, using, as model system, the vinegar fly from divergent climates along eastern Australia. The inventory will result in new methods for monitoring climatic change impact on populations, and for testing adaptive potential of organisms from threatened habitats. A key hypothesis is that these organisms have restricted genetic options to counter environmental change, increasing extinction risk. The program investigates genetic adaptation to pollutants in midges, a key group for monitoring water health. By assessing evolutionary potential and DNA species markers, biological signatures of aquatic pollutants should result.Read moreRead less
Sex determination in dragons: Genetics, epigenetics and environment. This project aims to discover the master sex-determining gene in a reptile, how that gene is differentially regulated in males and females and by temperature, and to identify evolutionary drivers of transitions between genetic and environmental sex determination. In many reptiles, like mammals, chromosomes determine sex. In others, the temperature at which their eggs are incubated determines sex. This project will study how tem ....Sex determination in dragons: Genetics, epigenetics and environment. This project aims to discover the master sex-determining gene in a reptile, how that gene is differentially regulated in males and females and by temperature, and to identify evolutionary drivers of transitions between genetic and environmental sex determination. In many reptiles, like mammals, chromosomes determine sex. In others, the temperature at which their eggs are incubated determines sex. This project will study how temperature reverses chromosomal sex determination in dragon lizards. This could show how climatic extremes affect the biology of climate sensitive reptiles, and understand their vulnerability to climate change.Read moreRead less
The genomics of climate adaptation in eucalypts. This project aims to investigate validated, rapid and pragmatic solutions to managing plant and animal maladaptation caused by global environmental change. Using Australia’s iconic blue gum (Eucalyptus globulus), this project will test strategies for identifying the major climatic predictors of, and key genomic regions that underlie, adaptation to climate change. By integrating climate variables and genome sequences with field trial-derived trait ....The genomics of climate adaptation in eucalypts. This project aims to investigate validated, rapid and pragmatic solutions to managing plant and animal maladaptation caused by global environmental change. Using Australia’s iconic blue gum (Eucalyptus globulus), this project will test strategies for identifying the major climatic predictors of, and key genomic regions that underlie, adaptation to climate change. By integrating climate variables and genome sequences with field trial-derived trait and performance data from decades of research and thousands of trees, we will develop validated DNA-based tools for monitoring the rate of adaptation in our native forests and identifying climate-ready seed sources for environmental and industrial plantings.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150100542
Funder
Australian Research Council
Funding Amount
$355,000.00
Summary
Understanding adaptation of plants along environmental clines. This project aims to address a key debate on the relative roles of dispersal and selection on adaptation, testing how life history traits determine the magnitude of adaptation. Since dispersal should override selection, this project endeavours to show that plants that strongly disperse will display weaker signals of adaptation but a higher capacity to adapt. The project aims to test these predictions with ecological genomics and func ....Understanding adaptation of plants along environmental clines. This project aims to address a key debate on the relative roles of dispersal and selection on adaptation, testing how life history traits determine the magnitude of adaptation. Since dispersal should override selection, this project endeavours to show that plants that strongly disperse will display weaker signals of adaptation but a higher capacity to adapt. The project aims to test these predictions with ecological genomics and functional genetics at a multi-species scale across climate gradients in South Australia, using a novel design that separates dispersal (isolation-by-distance) from selection (isolation-by-ecology). This understanding will provide improved conservation planning that seeks to restore resilience to biological communities that are under increasing environmental pressures.Read moreRead less
Understanding adaptation to improve conservation of Australian flora. Using the Australian flora as our model, this project aims to tackle a central issue of evolution and conservation - what drives species adaptation? Since dispersal should override selection in populations, we predict that plants that are good dispersers will display weak signals of adaptation, but a higher capacity to adapt, than poorer dispersers. From these expectations we plan to develop a new adaptation guild classificati ....Understanding adaptation to improve conservation of Australian flora. Using the Australian flora as our model, this project aims to tackle a central issue of evolution and conservation - what drives species adaptation? Since dispersal should override selection in populations, we predict that plants that are good dispersers will display weak signals of adaptation, but a higher capacity to adapt, than poorer dispersers. From these expectations we plan to develop a new adaptation guild classification, and test predictions using ecological genomics and functional genetics at a continental and multi-species scale. In addition to progressing a central tenet of evolutionary biology, this project aims to improve seed sourcing and biodiversity management, readily applicable to plants that can be quickly classified by life history traits.Read moreRead less