Brassica genome organisation and evolution: unlocking the potential of using genome-specific repetitive elements for crop improvement. Introgression of chromosome segments from related Brassica species provides an opportunity to develop locally adapted varieties with improved agronomic and quality traits. There is a need to understand Brassica genome organisation and how this information can be used for enhancing the efficiency of cultivar development. Dispersed and tandem repetitive DNA sequen ....Brassica genome organisation and evolution: unlocking the potential of using genome-specific repetitive elements for crop improvement. Introgression of chromosome segments from related Brassica species provides an opportunity to develop locally adapted varieties with improved agronomic and quality traits. There is a need to understand Brassica genome organisation and how this information can be used for enhancing the efficiency of cultivar development. Dispersed and tandem repetitive DNA sequences provide valuable information on the organisation and evolution of plant chromosomes. Methods for monitoring chromosome segment transfer across Brassica species will be developed based on detecting and quantifying genome-specific repetitive DNA sequences. Australian Brassica improvement programs could benefit from this research by adopting methods to detect chromosome segment transfer during interspecific hybridisation.Read moreRead less
A novel reversible male sterility system for hybrid seed production in canola, cotton and oilseed mustard. Demand for grains, fibre and other agricultural products has recently increased significantly. Hence, the security of food production is emerging as a critical global issue. We have identified a central component (AtMYB103) controlling tapetum and thus pollen development and designed a novel reversible male sterility system using AtMYB103. The efficient hybrid seed production systems develo ....A novel reversible male sterility system for hybrid seed production in canola, cotton and oilseed mustard. Demand for grains, fibre and other agricultural products has recently increased significantly. Hence, the security of food production is emerging as a critical global issue. We have identified a central component (AtMYB103) controlling tapetum and thus pollen development and designed a novel reversible male sterility system using AtMYB103. The efficient hybrid seed production systems developed in this project for canola, cotton and mustard will increase the productivity of the Australian oilseed and fibre industries. AtMYB103 gene is conserved among many crop plants. Hence, the new technologies and knowledge gained will be applicable to a wide range of crop plants and have important implications for the agricultural and food industries.Read moreRead less
Exploiting the Arabidopsis genome sequence as a molecular 'toolbox' for Brassica improvement. Australia's position as a major exporter of canola (Brassica napus) is under threat from genetic improvements in yield and quality being made by our international competitors. We will identify genes from Arabidopsis (the 'tool-box') that will be used to increase the speed of selection of new canola varieties with improved oleic acid content, disease resistance, and agronomic traits such as early flower ....Exploiting the Arabidopsis genome sequence as a molecular 'toolbox' for Brassica improvement. Australia's position as a major exporter of canola (Brassica napus) is under threat from genetic improvements in yield and quality being made by our international competitors. We will identify genes from Arabidopsis (the 'tool-box') that will be used to increase the speed of selection of new canola varieties with improved oleic acid content, disease resistance, and agronomic traits such as early flowering and cold tolerance. Genome similarity between Arabidopsis and canola will be exploited to map specific genes from Arabidopsis directly into canola. Based on this knowledge, we will develop gene-specific molecular markers for rapid selection of Australian-adapted canola varieties.Read moreRead less
Improved Indian Mustard for sustainable biodiesel production. There is an urgent need to reduce Australia's dependency on fossil fuels and to improve the sustainability of the Australian farming sector. The on-farm production of biodiesel will reduce farm input costs, reduce farmer dependency on fluctuations in fossil fuel costs and reduce greenhouse gas emissions. Indian mustard is drought tolerant and produces inedible oil suitable for biodiesel production. The genetic improvement of Indian mu ....Improved Indian Mustard for sustainable biodiesel production. There is an urgent need to reduce Australia's dependency on fossil fuels and to improve the sustainability of the Australian farming sector. The on-farm production of biodiesel will reduce farm input costs, reduce farmer dependency on fluctuations in fossil fuel costs and reduce greenhouse gas emissions. Indian mustard is drought tolerant and produces inedible oil suitable for biodiesel production. The genetic improvement of Indian mustard will provide farmers with a viable crop for biodiesel production and its bio-fumigation properties make it an effective addition to the crop rotation. Useful by-products include a natural insecticide and, once the glucosinolates are removed, meal suitable for animal feed. Read moreRead less
Combining molecular plant physiology and breeding to improve canola (Brassica napus) performance in dry environments. Canola is Australia's most important oilseed crop with 1,400,000 hectares sown annually worth $560m. The major abiotic factor limiting canola production in Australia is water availability. Transpiration efficiency (TE) is a trait with potential to contribute to improved drought tolerance of grain crops. This project seeks to select canola germplasm with improved TE by indirect s ....Combining molecular plant physiology and breeding to improve canola (Brassica napus) performance in dry environments. Canola is Australia's most important oilseed crop with 1,400,000 hectares sown annually worth $560m. The major abiotic factor limiting canola production in Australia is water availability. Transpiration efficiency (TE) is a trait with potential to contribute to improved drought tolerance of grain crops. This project seeks to select canola germplasm with improved TE by indirect selection for carbon-isotope-discrimination. In addition we will use the extensive Brassica-Arabidopsis genome synteny to locate and alter the expression of genes involved in TE using Arabidopsis as a model. The longterm aim is to improve the reliability and overall grain production of canola in Australia. Read moreRead less
Developing technology for the cost effective de novo sequencing and analysis of complex genomes. Applying the latest scientific advances supports society directly through promoting a knowledge based economy, as well as indirectly through securing agricultural productivity and improved biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian biomedical and biotechnology industries. Maintaining agricultural ....Developing technology for the cost effective de novo sequencing and analysis of complex genomes. Applying the latest scientific advances supports society directly through promoting a knowledge based economy, as well as indirectly through securing agricultural productivity and improved biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national challenge, both for rural and urban communities. This sequencing technology will provide a detailed understanding of crop genome structure and lead to the development of crops that are better suited to the Australian climate, supporting a sustainable agricultural industry. Read moreRead less
Characterising genetic variation in Brassica napus. Applying the latest scientific advances supports society through promoting a knowledge based economy, as well as through securing agricultural productivity and biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian agricultural, biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national ....Characterising genetic variation in Brassica napus. Applying the latest scientific advances supports society through promoting a knowledge based economy, as well as through securing agricultural productivity and biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian agricultural, biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national challenge, both for rural and urban communities. This technology will provide a detailed understanding of crop genome variation in relation to agronomic traits and lead to the development of crops that are better suited to the Australian climate, supporting a sustainable agricultural industry.Read moreRead less
Expanding the gene pool of canola (Brassica napus) by introgressing valuable genes from related species. Canola is a high value export crop from Australia, and an important rotational crop which improves sustainability of agriculture through a disease and weed break for cereal crops. While breeders have improved quality, disease resistance and adaptation of canola to Australian conditions over the past 30 years, this has reduced genetic variation to dangerously low levels. Wide crossing with d ....Expanding the gene pool of canola (Brassica napus) by introgressing valuable genes from related species. Canola is a high value export crop from Australia, and an important rotational crop which improves sustainability of agriculture through a disease and weed break for cereal crops. While breeders have improved quality, disease resistance and adaptation of canola to Australian conditions over the past 30 years, this has reduced genetic variation to dangerously low levels. Wide crossing with drought tolerant Brassica carinata (Ethiopean mustard) will help to alleviate this problem. New uses of biotechnology, combined with molecular genetics, will help to overcome species barriers to introduce useful new genes into canola for Australian canola breeders.Read moreRead less
Role of alanine aminotransferase in improved nitrogen use efficiency (NUE) in cereals. The use of nitrogen-based fertilisers by crop plants is poor where efficiencies (nitrogen taken up to that applied) is often less than 40%. Nitrogen not used is often lost to the environment through leaching and or volatilisation. Improving nitrogen use efficiency (NUE) in agriculture will decrease overall nitrogen fertiliser use and minimise its environmental footprint. This project will characterise a nov ....Role of alanine aminotransferase in improved nitrogen use efficiency (NUE) in cereals. The use of nitrogen-based fertilisers by crop plants is poor where efficiencies (nitrogen taken up to that applied) is often less than 40%. Nitrogen not used is often lost to the environment through leaching and or volatilisation. Improving nitrogen use efficiency (NUE) in agriculture will decrease overall nitrogen fertiliser use and minimise its environmental footprint. This project will characterise a novel NUE technology that when transferred to plants significantly improves NUE. We will define the phenotype at the molecular, biochemical and physiological levels to maximise its adoption to other agricultural crops such as wheat, barley and maize.Read moreRead less
Isolation and characterization of cell signalling systems that activate or suppress apoptosis in pathogenic and symbiotic fungal:plant interactions. The key roles of programmed cell death (PCD) in plant disease are becoming apparent. This project will test the hypotheses that successful colonisation by arbuscular mycorrhizae in plant roots requires the plant to up-regulate inhibitors of PCD; that susceptibility in plants to necrotrophic fungal pathogens requires triggering of PCD; and that resis ....Isolation and characterization of cell signalling systems that activate or suppress apoptosis in pathogenic and symbiotic fungal:plant interactions. The key roles of programmed cell death (PCD) in plant disease are becoming apparent. This project will test the hypotheses that successful colonisation by arbuscular mycorrhizae in plant roots requires the plant to up-regulate inhibitors of PCD; that susceptibility in plants to necrotrophic fungal pathogens requires triggering of PCD; and that resistance is the result of activation of inhibitors of PCD. This international project will have important implications biologically and economically for control of plant disease and symbiosis, will train early career researchers in an area of international expertise and will strengthen collaboration between the US and Australian research groupRead moreRead less