Proteomic and genetic analysis of subfertile bull spermatozoa. This project aims to identify protein changes on spermatozoa that are highly correlated with the fertility status of bulls. Bull fertility has approached an all-time low as breeding practice has focused predominately on milk production and beef tenderness. This project aims to understand the genetic causes that underpin bull and cattle infertility, and investigate better methods to predict the fertility status of bulls. This project ....Proteomic and genetic analysis of subfertile bull spermatozoa. This project aims to identify protein changes on spermatozoa that are highly correlated with the fertility status of bulls. Bull fertility has approached an all-time low as breeding practice has focused predominately on milk production and beef tenderness. This project aims to understand the genetic causes that underpin bull and cattle infertility, and investigate better methods to predict the fertility status of bulls. This project expects to contribute to better clinical management of cattle. This information can then be used for the development of a better diagnostic assay for both the dairy and beef industry.Read moreRead less
Integrating a physical and functional genetic map of Prunus dulcis. Genome wide physical mapping is the centrepiece of current genomics research in virtually all plant and animal species. The proposal seeks to champion the development of Prunus dulcis (Rosaceae) as a model perennial species towards parity with other plant model systems for gene discovery and validation. The Rosaceae represents a rich repository of genes of relevance to perenniality, adaptation, sustainable agriculture, health a ....Integrating a physical and functional genetic map of Prunus dulcis. Genome wide physical mapping is the centrepiece of current genomics research in virtually all plant and animal species. The proposal seeks to champion the development of Prunus dulcis (Rosaceae) as a model perennial species towards parity with other plant model systems for gene discovery and validation. The Rosaceae represents a rich repository of genes of relevance to perenniality, adaptation, sustainable agriculture, health and nutrition and the bioindustries. Ultimately, comparative genomics across the family will advance molecular eco-genetics via dissection of traits determining adaptive response. Access to user-friendly molecular markers will also bring greater precision to breeding programmes. Read moreRead less
Beyond pineal melatonin: sensing the seasons without the eye. The project will identify the causal connection between seasonal breeding in animals and a recently recognised brain biochemical pathway by applying experimental treatments mimicking seasonal environmental changes in a mutant and wild-type nematode worm model. Through experimentation we will identify useful biological targets that might be manipulated to enhance control of seasonal breeding in managed animals. With better control of r ....Beyond pineal melatonin: sensing the seasons without the eye. The project will identify the causal connection between seasonal breeding in animals and a recently recognised brain biochemical pathway by applying experimental treatments mimicking seasonal environmental changes in a mutant and wild-type nematode worm model. Through experimentation we will identify useful biological targets that might be manipulated to enhance control of seasonal breeding in managed animals. With better control of reproductive output in animals, farmers and managers can increase and/or decrease reproductive output as needed in managed species including livestock and vertebrate pests. This will enhance the use of precious land resources and minimize ecological damage from overbreeding.Read moreRead less
Biofertiliser technology for improved yields and environmental sustainability of rice and wheat crops. Australia faces the double challenge of improving the efficiency of its crop production while minimising the agricultural impact on its fragile biodiversity. Our project will meet this challenge by providing the technology for using natural biofertilisers in cereal crops. This will reduce our heavy reliance on chemical fertilisers - with associated soil loss, salinity and acidity, and high dema ....Biofertiliser technology for improved yields and environmental sustainability of rice and wheat crops. Australia faces the double challenge of improving the efficiency of its crop production while minimising the agricultural impact on its fragile biodiversity. Our project will meet this challenge by providing the technology for using natural biofertilisers in cereal crops. This will reduce our heavy reliance on chemical fertilisers - with associated soil loss, salinity and acidity, and high demand on scarce water resources - and significantly increase our crop yields. Our advances will help Australian farmers to reduce the costs and increase the productivity of our substantial export crops while improving their environmental sustainability.Read moreRead less
A formal foundation for security architecture. Security of computer systems is essential for the maintenance of privacy, confidentiality and integrity of personal, commercial and government data, and the trustworthiness of the computational devices that are embedded in critical societal infrastructure. However, current theoretical understanding of secure systems development is poor. The project will develop our understanding of an emerging approach to the design of secure systems and develop ver ....A formal foundation for security architecture. Security of computer systems is essential for the maintenance of privacy, confidentiality and integrity of personal, commercial and government data, and the trustworthiness of the computational devices that are embedded in critical societal infrastructure. However, current theoretical understanding of secure systems development is poor. The project will develop our understanding of an emerging approach to the design of secure systems and develop verification methods that may be applied to guarantee systems security. Its outcomes will contribute to processes for certifying systems at very high levels of security, a requirement in defence and government settings that will become increasingly significant in the commercial sector.Read moreRead less
Regulation of Plant Development by Small RNAs. Understanding the roles of small RNAs and their pathways is a new field of research that is giving, and will continue to give profound insights into how multicellular organisms regulate gene expression at a genomic level. Research in this area has already led to RNA interference technology, by which almost any gene can be switched off, and there is considerable potential for other gene silencing and trait modification technologies to emerge. The pro ....Regulation of Plant Development by Small RNAs. Understanding the roles of small RNAs and their pathways is a new field of research that is giving, and will continue to give profound insights into how multicellular organisms regulate gene expression at a genomic level. Research in this area has already led to RNA interference technology, by which almost any gene can be switched off, and there is considerable potential for other gene silencing and trait modification technologies to emerge. The project will yield insights into fundamental biological processes which are expected to engender applications in agriculture and biotechnology. It will maintain and enhance Australia's position in this area.Read moreRead less
Starting closer to home: disease control and the nonhost resistance paradigm in plants. The wellbeing of all humans depends upon plant production. This project will investigate the feasibility of transferring disease resistance genes among wheat, barley and oats, which account for 78 per cent of Australian grain production, to achieve sustained disease control, by dissecting the genetic bases of resistance to stem rust across these three crop species.
Implementing Feferman-Landin Logic. The objective of this project is to utilise computer based verification tools (such as PVS and Rewritting Logic) to develop a software engineering environment for specifying and verifying systems written in high-level programming languages such as Java, Scheme, and ML. The project will thus subtantially advance the use of formal computer based tools to develop reliable programs and specifications for life-critical systems. The project will also develop form ....Implementing Feferman-Landin Logic. The objective of this project is to utilise computer based verification tools (such as PVS and Rewritting Logic) to develop a software engineering environment for specifying and verifying systems written in high-level programming languages such as Java, Scheme, and ML. The project will thus subtantially advance the use of formal computer based tools to develop reliable programs and specifications for life-critical systems. The project will also develop formally
based interoperability between the PVS and Maude systems, two widely
used computer tools for reasoning about complex systems.Read moreRead less
Enhancing long-term soil organic carbon sequestration. This project addresses National Research Priority One areas, restoration of land surfaces through sustainable land management practices and sequestration of carbon. The resulting data will be transferable to domestic and international sustainable agricultural and land rehabilitation applications. The project specifically addresses an area of global significance, the long-term, millennia rather than short-term sequestration of terrestrial car ....Enhancing long-term soil organic carbon sequestration. This project addresses National Research Priority One areas, restoration of land surfaces through sustainable land management practices and sequestration of carbon. The resulting data will be transferable to domestic and international sustainable agricultural and land rehabilitation applications. The project specifically addresses an area of global significance, the long-term, millennia rather than short-term sequestration of terrestrial carbon. There will be spin-off benefits including the provision of a formula for sustainable agriculture resources and localised employment opportunities, educational and financial incentives for farmers to improve on-farm soil health as well as health benefits from the reduction of atmospheric CO2.Read moreRead less
Identification of causal variants for complex traits. The aim of this project is to identify causal variants for complex traits in cattle and humans. Although most important traits in agriculture, medicine and evolution are complex traits, very few of the genetic variants affecting these traits are known and this undermines our understanding of how genetic variants affect a trait and practical uses of this knowledge. Huge datasets of individuals with genome sequence and phenotypes and new statis ....Identification of causal variants for complex traits. The aim of this project is to identify causal variants for complex traits in cattle and humans. Although most important traits in agriculture, medicine and evolution are complex traits, very few of the genetic variants affecting these traits are known and this undermines our understanding of how genetic variants affect a trait and practical uses of this knowledge. Huge datasets of individuals with genome sequence and phenotypes and new statistical methods provide the opportunity to close this gap. The outcome will be identification of many genomic variants causing variation in complex traits. This will benefit scientific understanding of complex traits and the ability to predict traits for individuals from their genome sequence.Read moreRead less