Markov invariants and phylogenetic tree reconstruction. The project will assist Australia to progress as an innovator in the production phylogenetic tree reconstruction techniques.
Identifying species is a difficult task with environmental, social and economic benefits to Australia. DNA evidence and phylogenetic methods clearly achieve this task. Conservation of rare species depends upon identification and hence robust phylogenetic analysis. Phylogenetically identifying fish species has econom ....Markov invariants and phylogenetic tree reconstruction. The project will assist Australia to progress as an innovator in the production phylogenetic tree reconstruction techniques.
Identifying species is a difficult task with environmental, social and economic benefits to Australia. DNA evidence and phylogenetic methods clearly achieve this task. Conservation of rare species depends upon identification and hence robust phylogenetic analysis. Phylogenetically identifying fish species has economic importance as different fish species are all managed separately, having different catch limits, catch areas and market values. Using effective phylogenetic methods, epidemiologists can track the spread of a disease through a population. Read moreRead less
Special Research Initiatives - Grant ID: SR0354683
Funder
Australian Research Council
Funding Amount
$10,000.00
Summary
Ocean Discovery Network. The ODN will focus research on Australia's vast marine jurisdiction by:
1. Providing a forum for developing coordinated marine research enterprises in the National Research Priority areas of biodiversity, exploitation of resources, seaway security and climate.
2. Developing innovative international research and providing a mechanism for involvement in international science programs
3. Advancing research capabilities between national and international ocean scientist ....Ocean Discovery Network. The ODN will focus research on Australia's vast marine jurisdiction by:
1. Providing a forum for developing coordinated marine research enterprises in the National Research Priority areas of biodiversity, exploitation of resources, seaway security and climate.
2. Developing innovative international research and providing a mechanism for involvement in international science programs
3. Advancing research capabilities between national and international ocean scientists with web-based data-exchange services and links to global databases
4. Facilitating the transfer of research skills to young investigators
5. Maximising multidisciplinary use of Australian ocean science capacity, particularly the National Facility Research Vessel and the RSV Aurora Australis
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Ecosystem level impacts of climate change on a temperate grassland. The sustainable use of temperate native pastures is important economically because of grazing and for biodiversity since they are home to many threatened plants. Native pasture sustainability depends on maintaining species diversity and vegetation productivity, both of which have been shown to change in response to climate change. The aims of this project are to elucidate what impact these changes have on the ecosystem propertie ....Ecosystem level impacts of climate change on a temperate grassland. The sustainable use of temperate native pastures is important economically because of grazing and for biodiversity since they are home to many threatened plants. Native pasture sustainability depends on maintaining species diversity and vegetation productivity, both of which have been shown to change in response to climate change. The aims of this project are to elucidate what impact these changes have on the ecosystem properties of a native pasture. This is important, as it will allow likely problems caused by global climate change to be predicted by increasing the understanding of the underlying mechanisms as well as improving the management of grasslands in an environmentally sustainable way. Read moreRead less
Structure and informatics of the genetic code. Recent advances in biotechnology have seen its emergence as a highly
quantitative, numerically-based discipline. To exploit the available
data to the full will require, alongside computing power, new
analytical techniques. This project aims to develop such techniques,
by handling the systematics of the genetic code with methods derived
from theoretical physics and chemistry. Expected outcomes include a
dynamical (quantum field theory) model ....Structure and informatics of the genetic code. Recent advances in biotechnology have seen its emergence as a highly
quantitative, numerically-based discipline. To exploit the available
data to the full will require, alongside computing power, new
analytical techniques. This project aims to develop such techniques,
by handling the systematics of the genetic code with methods derived
from theoretical physics and chemistry. Expected outcomes include a
dynamical (quantum field theory) model of phylogenetic branching,
analyses of nucleic acid structure and content (spin chain models of
RNA binding and of DNA open reading frames), and insights into the
origin of the code itself (via numerical codon similarity measures).
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Impacts of climate change on sustainability of temperate native pasture: an experiment. The sustainable use of temperate native pastures is important economically because of grazing and for biodiversity since they are home to many threatened plants. Native pasture sustainability depends on maintaining species diversity and vegetation productivity. Climate change is likely to have major impacts on both factors. The aims of this project are to elucidate the impacts of climate change on the species ....Impacts of climate change on sustainability of temperate native pasture: an experiment. The sustainable use of temperate native pastures is important economically because of grazing and for biodiversity since they are home to many threatened plants. Native pasture sustainability depends on maintaining species diversity and vegetation productivity. Climate change is likely to have major impacts on both factors. The aims of this project are to elucidate the impacts of climate change on the species composition, productivity and nutritional quality of a grazed native pasture. This is important, as it will allow us to predict likely problems caused by global climate change and increase our understanding of the mechanisms underlying these changes.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE140100946
Funder
Australian Research Council
Funding Amount
$394,561.00
Summary
410 million years of stomatal evolution: key innovations in the transition from passive valves to active pores. Central to the supremacy of seed plants was the evolution of active, metabolic control of the stomata; the pores that regulate both plant productivity and water loss. However, little is known about the transition from passive control of stomata in seedless plants to active stomatal control in seed plants. This project will identify the key physiological and genetic innovations that und ....410 million years of stomatal evolution: key innovations in the transition from passive valves to active pores. Central to the supremacy of seed plants was the evolution of active, metabolic control of the stomata; the pores that regulate both plant productivity and water loss. However, little is known about the transition from passive control of stomata in seedless plants to active stomatal control in seed plants. This project will identify the key physiological and genetic innovations that underpinned the evolution of stomatal control over the past 410 million years. Understanding these evolutionary innovations will offer important insights into stomatal function in seed plants, as well as informing models of global productivity and water use through time, with benefits for Australian agriculture and natural resource management.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0668471
Funder
Australian Research Council
Funding Amount
$262,706.00
Summary
Hyphenated Capillary Electrophoresis - Mass Spectrometry Facility. The requested funding will facilitate the expansion of the activities of the University of Tasmania (UTas) node of the Australian Centre for Research on Separation Science and its collaborators. This initiative will involve the application of integrated, high resolution technologies for the separation and identification of complex chemical and biological samples. The instrument is to be shared by a number of highly research-activ ....Hyphenated Capillary Electrophoresis - Mass Spectrometry Facility. The requested funding will facilitate the expansion of the activities of the University of Tasmania (UTas) node of the Australian Centre for Research on Separation Science and its collaborators. This initiative will involve the application of integrated, high resolution technologies for the separation and identification of complex chemical and biological samples. The instrument is to be shared by a number of highly research-active groups at UTas in the fields of chemistry, biochemistry, plant and agricultural science, Antarctic studies, and pharmacy where detailed structural identification of components separated from complex mixtures is essential. These projects all focus on fundamental and applied research of great national significance.Read moreRead less
A longitudinal study of neuropsychological and neuromotor effects of low level manganese exposure. This study will investigate the neuropsychological and neuromotor effects of low level exposure to mangenese particulate. Previous studies have indicated symptomology of high level exposure, but there is contention in the literature regarding the effects of low levels of exposure. Our aim is to refine measures of cumulative exposure and develop a more comprehensive and senstitive testing protocol t ....A longitudinal study of neuropsychological and neuromotor effects of low level manganese exposure. This study will investigate the neuropsychological and neuromotor effects of low level exposure to mangenese particulate. Previous studies have indicated symptomology of high level exposure, but there is contention in the literature regarding the effects of low levels of exposure. Our aim is to refine measures of cumulative exposure and develop a more comprehensive and senstitive testing protocol than has been reported thus far. These measures and protocols will be incorporated into a longitudinal design, which has not been conducted in research studies to date. In addition, a database of exposure variables will be developed to facilitate long-term, accurate research into the effects of the low levels of exposure.Read moreRead less
Algebraically informed models of biological sequence evolution. To make sense of the patterns they see in the natural world, biologists across fields as diverse as genetics, epidemiology and biogeography need an accurate picture of evolutionary history. DNA sequences provide an exciting means to establish this picture of the past, but to decode it successfully requires mathematical models of how DNA evolves. Mathematical inconsistencies have been identified with current approaches. In particular ....Algebraically informed models of biological sequence evolution. To make sense of the patterns they see in the natural world, biologists across fields as diverse as genetics, epidemiology and biogeography need an accurate picture of evolutionary history. DNA sequences provide an exciting means to establish this picture of the past, but to decode it successfully requires mathematical models of how DNA evolves. Mathematical inconsistencies have been identified with current approaches. In particular, understanding the effect of natural selection in different parts of the tree of life requires models that behave robustly in the face of shifting evolutionary processes. This project aims to use insights from algebraic methods to construct mathematically consistent models of wide biological utility.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE130100423
Funder
Australian Research Council
Funding Amount
$369,061.00
Summary
Group theory and phylogenetics: exploiting symmetry to uncover evolutionary history. Using advanced algebra, structural symmetries inherent in phylogenetic methods will be studied and improved approaches will be derived. DNA sequences contain a wealth of information about evolutionary events that occurred millions of years ago, but extracting this information requires the application of robust methods.