Saddlepoint approximation, likelihood analysis and ancestral graphs for strong and weak natural selection, genetic drift and population subdivision. Building new research strength in theoretical population genetics and related statistical techniques will enhance Australia's capability in harnessing the power of post-genomic information. Sophisticated statistical techniques that make smart use of genetic data are being developed in this project. The extent to which natural selection and migrati ....Saddlepoint approximation, likelihood analysis and ancestral graphs for strong and weak natural selection, genetic drift and population subdivision. Building new research strength in theoretical population genetics and related statistical techniques will enhance Australia's capability in harnessing the power of post-genomic information. Sophisticated statistical techniques that make smart use of genetic data are being developed in this project. The extent to which natural selection and migration affect current genetic polymorphism on a population level can be quantified using these new methods. New modeling provides a rigorous foundation with which to construct inference techniques currently beyond computational approaches to the data. Assessing selective effects on genetic mutations associated with human disease will be a consequence of this new statistical methodology.Read moreRead less
The prediction of sleep/wake behaviour based on physiological and social factors. The prevalence of shiftwork has increased in Australia over the last few decades. Shiftworkers obtain less sleep, have greater difficulty maintaining good relationships, have poorer health, and are more likely to be injured at work than others. Using the largest dataset of its kind, we will substantially contribute to understanding the relationships between work hours, sleep, performance and safety. Ultimately, the ....The prediction of sleep/wake behaviour based on physiological and social factors. The prevalence of shiftwork has increased in Australia over the last few decades. Shiftworkers obtain less sleep, have greater difficulty maintaining good relationships, have poorer health, and are more likely to be injured at work than others. Using the largest dataset of its kind, we will substantially contribute to understanding the relationships between work hours, sleep, performance and safety. Ultimately, the project will answer a question critical to workplace safety - how much time off between shifts is needed to be alert and safe at work? The project will also produce tools to help industry design fatigue-friendly rosters, improving the safety, productivity and general well-being of shiftworkers in Australia and overseas.Read moreRead less
Development of Pyrrolopyrimidines as Inhibitors of ATP-Binding Proteins. This project seeks to generate analogues of natural products that have been found to be active against cancer cells and tropical parasites. The new materials produced by this project will aid in the study of biochemical processes involved in diseases such as cancer and lymphatic filariasis, thus leading the way to development of these compounds as potential treatments for such diseases.
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0347962
Funder
Australian Research Council
Funding Amount
$218,000.00
Summary
Adelaide Mass Spectrometry and Analysis Facility. This joint proposal by two South Australian universities and the Hanson Institute seeks to establish a facility for rapid characterisation and identification of biomolecules by means of MALDI-TOF and Nano LC mass spectrometry. The requested equipment is not available in South Australia. This proposal would establish a Nano LC (Q-TOF) node at the University of Adelaide-University of South Australia location and a MALDI-TOF node at the Flinders loc ....Adelaide Mass Spectrometry and Analysis Facility. This joint proposal by two South Australian universities and the Hanson Institute seeks to establish a facility for rapid characterisation and identification of biomolecules by means of MALDI-TOF and Nano LC mass spectrometry. The requested equipment is not available in South Australia. This proposal would establish a Nano LC (Q-TOF) node at the University of Adelaide-University of South Australia location and a MALDI-TOF node at the Flinders location. Its presence would greatly enhance the quality of research and teaching in priority areas such as proteomics, bioinformatics and nanotechnology and would provide a basis for fostering university and biotechnology industry collaborations.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0239035
Funder
Australian Research Council
Funding Amount
$900,000.00
Summary
Regional facility for surface and micro-structure analysis. Adelaide, Flinders and SA Universities seek to enhance the regional facility for surface and microstructure analysis. Equipment includes electron back scatter pattern imaging, high resolution coater, microprobe (CAMECA SX51) upgrade and X ray microtomography to be located at Adelaide University Centre for Electron Microscopy and Microstructure Analysis, the hub of the regional facility. The University of South Australia Ian Wark Researc ....Regional facility for surface and micro-structure analysis. Adelaide, Flinders and SA Universities seek to enhance the regional facility for surface and microstructure analysis. Equipment includes electron back scatter pattern imaging, high resolution coater, microprobe (CAMECA SX51) upgrade and X ray microtomography to be located at Adelaide University Centre for Electron Microscopy and Microstructure Analysis, the hub of the regional facility. The University of South Australia Ian Wark Research Institute node will house ToF-SIMS and SAM upgrades, the Flinders node a multimode STM atomic force microscope, and the Adelaide University Waite Campus node confocal xyz control and digital camera. Applications include biological, materials and geological research projects.Read moreRead less
Designing microarray experiments. Microarrays are powerful tools for surveying the expression levels of many thousands of genes simultaneously. They belong to the new genomics technologies which have important applications in the biological, pharmaceutical and agricultural sciences. There are many sources of uncertainty in microarray experimentation and good statistical designs are essential for ensuring that the effects of interest to scientists are accurately and precisely measured. This Pr ....Designing microarray experiments. Microarrays are powerful tools for surveying the expression levels of many thousands of genes simultaneously. They belong to the new genomics technologies which have important applications in the biological, pharmaceutical and agricultural sciences. There are many sources of uncertainty in microarray experimentation and good statistical designs are essential for ensuring that the effects of interest to scientists are accurately and precisely measured. This Project will develop novel designs for microarray experiments and focus on the advancement of topics crucial to Australia's success in technological research.
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Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0882289
Funder
Australian Research Council
Funding Amount
$520,000.00
Summary
New generation mass spectrometers for characterisation of molecular shape and size. The ion mobility mass spectrometer (IMMS at UOW) will be the first of its kind in Australia, and together with the ion trap mass spectrometer (ITMS at ANU) will continue the tradition of this partnership in providing researchers with cutting-edge instrumentation for nationally and internationally important projects including: (i) fundamental understanding of the ways in which biomolecules recognize one another, ( ....New generation mass spectrometers for characterisation of molecular shape and size. The ion mobility mass spectrometer (IMMS at UOW) will be the first of its kind in Australia, and together with the ion trap mass spectrometer (ITMS at ANU) will continue the tradition of this partnership in providing researchers with cutting-edge instrumentation for nationally and internationally important projects including: (i) fundamental understanding of the ways in which biomolecules recognize one another, (ii) investigating the structure(s) of lipids (fats) in cardiovascular disease and cataract, (iii) developing anticancer drugs, and (iv) development of new materials.Read moreRead less
Genetic dissection of a regulatory deubiquitlyation network. The potential impact of this work is widespread, because although it is known that ubiquitlyation has regulatory consequences in multicellular eukaryotes, individual networks have not been completely described in higher eukaryotes. Knowledge gained about fundamental processes in the A. nidulans model system is directly applicable to fungi used in biotechnology in the food, beverage, enzyme and pharmaceutical production industries, and ....Genetic dissection of a regulatory deubiquitlyation network. The potential impact of this work is widespread, because although it is known that ubiquitlyation has regulatory consequences in multicellular eukaryotes, individual networks have not been completely described in higher eukaryotes. Knowledge gained about fundamental processes in the A. nidulans model system is directly applicable to fungi used in biotechnology in the food, beverage, enzyme and pharmaceutical production industries, and to fungal pathogens. Since the fungal genes that form the basis of this project are conserved in higher eukaryotes including humans, the knowledge will be transferable to these systems. A further benefit that cannot be overstated is the research education and training opportunities provided.
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Novel Mass Spectrometric Approaches to the Study of Protein-Protein Interactions. Protein-protein interactions mediate all fundamental cellular processes, yet the structural complexity of protein assemblies mean they are often difficult to characterise using traditional analytical methods. This project will develop and demonstrate novel mass spectrometric approaches towards a molecular level description of the structure and interactions of biological protein complexes, which in turn may underpi ....Novel Mass Spectrometric Approaches to the Study of Protein-Protein Interactions. Protein-protein interactions mediate all fundamental cellular processes, yet the structural complexity of protein assemblies mean they are often difficult to characterise using traditional analytical methods. This project will develop and demonstrate novel mass spectrometric approaches towards a molecular level description of the structure and interactions of biological protein complexes, which in turn may underpin the rational design of drugs for the treatment of a range of human health conditions. This project will also provide training of young researchers to the highest international standards in mass spectrometry and protein science, for benefit to Australian industry and research.Read moreRead less
A modelling challenge: bridging the gap between molecular and neuronal networks. We will develop innovative frameworks, which unify small-scale molecular activity with electrical signals in branches of brain cells. This research aims to enhance our understanding how molecular scale phenomena influence brain disease, via studying the model dynamics using cutting-edge techniques on a supercomputer. The socio-economic benefits to Australia include: (i) Enhancing Australia's international reputation ....A modelling challenge: bridging the gap between molecular and neuronal networks. We will develop innovative frameworks, which unify small-scale molecular activity with electrical signals in branches of brain cells. This research aims to enhance our understanding how molecular scale phenomena influence brain disease, via studying the model dynamics using cutting-edge techniques on a supercomputer. The socio-economic benefits to Australia include: (i) Enhancing Australia's international reputation for cutting-edge multidisciplinary research; (ii) international collaborations will be strengthened; (iii) outcomes will potentially lead to commercialisation opportunities; (iv) results will ultimately lay the foundations to explore the cellular and molecular origin of brain disorders.Read moreRead less