An efficient approach to the computation of bacterial evolutionary distance. This project aims to apply advanced mathematical tools to improve our understanding of bacterial evolution. Bacteria account for as much total Earth biomass as all plant species put together, and have an unparalleled ability to evolve quickly and adapt to changing environments. Unfortunately, the existing mathematical models used to model bacterial evolution are generally computationally intractable. This project will r ....An efficient approach to the computation of bacterial evolutionary distance. This project aims to apply advanced mathematical tools to improve our understanding of bacterial evolution. Bacteria account for as much total Earth biomass as all plant species put together, and have an unparalleled ability to evolve quickly and adapt to changing environments. Unfortunately, the existing mathematical models used to model bacterial evolution are generally computationally intractable. This project will rectify this situation by using representation theory to transform combinatorial group theory into linear algebra, allowing for the application of advanced methods of numeric approximation. This will provide a better understanding of how bacteria evolve and improve our ability to manage their impact.Read moreRead less
Modelling and estimation techniques for the transmission and control of Tuberculosis with new and existing vaccines. Most Tuberculosis in Australia is seen in foreign-born people. Australia has an important role in providing leadership in the Asia-Pacific region in Tuberculosis control, which will have flow-on benefits to TB control in this country. Using mathematical models, this project will assess the use of vaccines for Tuberculosis in the developing world. Rising levels of extremely drug r ....Modelling and estimation techniques for the transmission and control of Tuberculosis with new and existing vaccines. Most Tuberculosis in Australia is seen in foreign-born people. Australia has an important role in providing leadership in the Asia-Pacific region in Tuberculosis control, which will have flow-on benefits to TB control in this country. Using mathematical models, this project will assess the use of vaccines for Tuberculosis in the developing world. Rising levels of extremely drug resistant infections make this a timely and important study with significant policy implications, both externally and in the Australian context. Read moreRead less
Robust State Estimation of Complex Multi-Object Systems. Conceptual advances will be made in the area of robust state estimation of complex systems. New design rules will be developed and published in the top international journals and major international conferences. The main benefit of this project will be its direct applications to industrial control problems in the military equipment and manufacturing industries, bio-engineering, and automobile industry. We also build a world class research ....Robust State Estimation of Complex Multi-Object Systems. Conceptual advances will be made in the area of robust state estimation of complex systems. New design rules will be developed and published in the top international journals and major international conferences. The main benefit of this project will be its direct applications to industrial control problems in the military equipment and manufacturing industries, bio-engineering, and automobile industry. We also build a world class research group at the University of New South Wales to focus attention on multi-object state estimation. There will be increased capacity for contract research, international collaboration with leading researchers in the area and high quality Ph.D. graduates in the field of Systems and Control.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE220100284
Funder
Australian Research Council
Funding Amount
$444,000.00
Summary
Multiscale mathematical modelling to gain insights into hepatitis viruses. This project aims to use mathematical modelling to study hepatitis viruses at multiple levels. The project expects to develop complex yet analysable mathematical models to comprehend the fundamental biology of hepatitis viruses by elucidating longitudinal patterns in viral and immune markers at intracellular and cellular levels, and advance a new subfield in mathematical biology, i.e., modelling codependent human viruses. ....Multiscale mathematical modelling to gain insights into hepatitis viruses. This project aims to use mathematical modelling to study hepatitis viruses at multiple levels. The project expects to develop complex yet analysable mathematical models to comprehend the fundamental biology of hepatitis viruses by elucidating longitudinal patterns in viral and immune markers at intracellular and cellular levels, and advance a new subfield in mathematical biology, i.e., modelling codependent human viruses. Expected outcomes of the project include new generalized mathematical tools, biological insights that may aid research beyond the scope of this project, and strong interdisciplinary collaborations. Expected benefits include an increased capacity of the research community in Australia to use mathematical models in virology.Read moreRead less
Innovations in spherical approximation - construction, analysis and applications. The motivating problems for this project come from geophysics, including climate, weather forecasting, planetary gravitation and magnetism, and from coding theory and molecular chemistry. National benefit is expected to arise both from an improved ability to handle problems of key economic importance, and from an enhanced position in the international scientific world, through public presentation in leading journa ....Innovations in spherical approximation - construction, analysis and applications. The motivating problems for this project come from geophysics, including climate, weather forecasting, planetary gravitation and magnetism, and from coding theory and molecular chemistry. National benefit is expected to arise both from an improved ability to handle problems of key economic importance, and from an enhanced position in the international scientific world, through public presentation in leading journals and international conferences, and from direct collaboration with internationally leading scientists from USA, UK and Germany. The project will also increase the pool of trained mathematicians with expertise in areas important for applications.
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Mathematical models and bioinformatic analyses of bacterial genome evolution. Bacteria are vital agents in earth's biosphere, breaking down and synthesising a wide variety of compounds. Some bacteria cause disease; others are exploited for a range of biotechnological applications. Bacteria have a remarkable ability to survive and thrive in changing conditions. For example, pathogenic bacteria confronted by antibiotics easily evolve resistance to them. With the reality of climate change, we expec ....Mathematical models and bioinformatic analyses of bacterial genome evolution. Bacteria are vital agents in earth's biosphere, breaking down and synthesising a wide variety of compounds. Some bacteria cause disease; others are exploited for a range of biotechnological applications. Bacteria have a remarkable ability to survive and thrive in changing conditions. For example, pathogenic bacteria confronted by antibiotics easily evolve resistance to them. With the reality of climate change, we expect more rapid shifts in the structure of bacterial communities, possibly leading to the emergence of new pathogens. The benefits of this project are to discover how the genetic structure of bacteria confer this flexibility, and to help keep Australia at the forefront of research in bioinformatics and mathematical biology.
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Joint System Identification for Point Processes and Time-series. In various application areas such as neurophysiology, earthquake modeling, price spikes in electricity markets, the data of interest are point processes (aka sequences of events) or combinations of point processes and analog signals. To understand the underlying subject of interest we need to be able to extract the maximum information from these observation sequences. The current tools for doing this are very limited. This resear ....Joint System Identification for Point Processes and Time-series. In various application areas such as neurophysiology, earthquake modeling, price spikes in electricity markets, the data of interest are point processes (aka sequences of events) or combinations of point processes and analog signals. To understand the underlying subject of interest we need to be able to extract the maximum information from these observation sequences. The current tools for doing this are very limited. This research program will develop the complex signal processing and system methodology needed to create a suitable tool set.Read moreRead less
Real-time scheduling of trains to control peak electricity demand. This project aims to develop new scheduling and control methods that will enable railways to reduce their demand for electricity during peak demand periods, without undue disruption to the timetable.
These new methods and systems will integrate with—and expand the capabilities of—an Australian train control system that is used by railways around the world. This will enable better management of electricity within a region and be ....Real-time scheduling of trains to control peak electricity demand. This project aims to develop new scheduling and control methods that will enable railways to reduce their demand for electricity during peak demand periods, without undue disruption to the timetable.
These new methods and systems will integrate with—and expand the capabilities of—an Australian train control system that is used by railways around the world. This will enable better management of electricity within a region and better use of renewable energy sources, with significant cost savings for railways and the wider community.Read moreRead less
Quantitative dynamics of functional magnetic resonance imaging. By modeling and verifying the dynamics of brain activity and blood flow that underlie functional magnetic resonance imaging (fMRI), this project will yield improved scientific outcomes and imaging sensitivity. The new data analysis techniques and technologies that result will yield potentially patentable intellectual property, and will increase the standing of Australia in this rapidly developing field, including via links being bu ....Quantitative dynamics of functional magnetic resonance imaging. By modeling and verifying the dynamics of brain activity and blood flow that underlie functional magnetic resonance imaging (fMRI), this project will yield improved scientific outcomes and imaging sensitivity. The new data analysis techniques and technologies that result will yield potentially patentable intellectual property, and will increase the standing of Australia in this rapidly developing field, including via links being built to leading international workers. The National Research Priority Goals of Frontier Technologies, Breakthrough Science, Smart Information Use, and Promoting an Innovation Economy will thus be advanced.Read moreRead less
Neural spike variability: unifying conflicting views of neural dynamics. The project aims to improve our understanding of neural dynamics. The brain represents and processes information by means of neural voltage spikes, which show great variability in their timing. Understanding the origin of such variable neural dynamics is a long-standing problem in neuroscience. The aim of this project is to develop a novel account of variable neural dynamics, unravelling their computational principles in th ....Neural spike variability: unifying conflicting views of neural dynamics. The project aims to improve our understanding of neural dynamics. The brain represents and processes information by means of neural voltage spikes, which show great variability in their timing. Understanding the origin of such variable neural dynamics is a long-standing problem in neuroscience. The aim of this project is to develop a novel account of variable neural dynamics, unravelling their computational principles in the brain, and unifying current leading but conflicting theories. The model developed in this project would be used to explain a range of empirical observations, and the principles unravelled would be applied to understand spike-timing based neural coding. The new knowledge gained in this project may have profound implications for designing brain-like computing devices.Read moreRead less