Adaptation to life in the dark: genomic analyses of blind beetles. This project aims to utilise a unique Australian model system based on multiple, independently-evolved subterranean water beetles to explore the adaptive and regressive changes in the genome that occur when surface species colonise subterranean habitats. This project focuses on the evolution of Heat Shock protein (Hsp) genes that play critical roles in adaptation to environmental stress and the process of de-canalisation, the rel ....Adaptation to life in the dark: genomic analyses of blind beetles. This project aims to utilise a unique Australian model system based on multiple, independently-evolved subterranean water beetles to explore the adaptive and regressive changes in the genome that occur when surface species colonise subterranean habitats. This project focuses on the evolution of Heat Shock protein (Hsp) genes that play critical roles in adaptation to environmental stress and the process of de-canalisation, the release of cryptic genetic variation that can allow novel morphologies to evolve in new environments. The project expects to provide further understanding of how species may potentially adapt to environmental stresses in the future, including climate change.Read moreRead less
Is regressive evolution associated with loss of gene function in subterranean animals? This project aims to investigate a fundamental biological process: the evolutionary basis for how non-functional characters, such as eyes in subterranean animals, are lost. It will use a unique model system based on eyeless water beetles, and utilise novel new genomic tools to test whether loss of characters results from gene inactivation.
How are visual gene pathways lost and restored during reptile evolution? This project aims to investigate how complex traits are lost during evolution, and once lost if they can be regained. The project will use the diverse visual systems of snakes and lizards to shed light on the process of gene loss in degenerative lineages, and discover the mechanisms that compensate for gene losses in taxa with secondarily evolved visual capabilities- providing a case of evolutionary re-innovation in complex ....How are visual gene pathways lost and restored during reptile evolution? This project aims to investigate how complex traits are lost during evolution, and once lost if they can be regained. The project will use the diverse visual systems of snakes and lizards to shed light on the process of gene loss in degenerative lineages, and discover the mechanisms that compensate for gene losses in taxa with secondarily evolved visual capabilities- providing a case of evolutionary re-innovation in complex traits.Read moreRead less
Adapting to a changing world: mothers as drivers of evolutionary change. This project will improve our understanding of how organisms will adapt to the unprecedented speed and magnitude of human-induced environmental change. By identifying how mothers modify their offspring to better match the prevailing environment, it will address the role of mothers in directing and accelerating adaptation in our changing world.
Molecular switches and genetic consequences of grain retention in cereals. Grain retention at maturity was key for crop domestication and laid the basis for farming. Wheat and barley have evolved a novel mechanism for ensuring grain retention and, although the genes are known, the mechanisms for action are not. Grain dispersal in the wild relatives involves highly targeted changes in the walls of a small number of cells. This project will explore how the two identified genes control this proces ....Molecular switches and genetic consequences of grain retention in cereals. Grain retention at maturity was key for crop domestication and laid the basis for farming. Wheat and barley have evolved a novel mechanism for ensuring grain retention and, although the genes are known, the mechanisms for action are not. Grain dispersal in the wild relatives involves highly targeted changes in the walls of a small number of cells. This project will explore how the two identified genes control this process and clarify their mode of action. The genes ensuring grain retention have been so critical for domestication that the region surrounding them has become genetically fixed. The project will assess the implication of fixation on genetic diversity and develop options to bring novel variation into breeding programs.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190101069
Funder
Australian Research Council
Funding Amount
$390,000.00
Summary
Adaptation and diversification of the first peoples of Sahul. This project aims to further advance work on the genetic history of Indigenous Australians and Papuans that has revealed that Aboriginal Australians have inhabited a variety of diverse and challenging environments for approximately 50,000 years. Using novel techniques for extraction of human DNA from soil and the use of cutting-edge graph-based methods, hundreds of Indigenous Australian and Papuan genomes will be analysed. This projec ....Adaptation and diversification of the first peoples of Sahul. This project aims to further advance work on the genetic history of Indigenous Australians and Papuans that has revealed that Aboriginal Australians have inhabited a variety of diverse and challenging environments for approximately 50,000 years. Using novel techniques for extraction of human DNA from soil and the use of cutting-edge graph-based methods, hundreds of Indigenous Australian and Papuan genomes will be analysed. This project expects to generate new knowledge by filling in the gaps in the Australian genetic record via ancient human DNA from sediments. Expected outcomes from this project are producing a detailed picture of genomic adaptation in Indigenous Australians and Papuans and creating a comprehensive genetic history of the First Peoples of Sahul.Read moreRead less
Adaptive Morphology and Evolution of Invasive Rabbits and Hares. This project aims to uncover the morphological variation that allows rapid adaptive evolution in two invasive species, the rabbit and hare. This project expects to generate new knowledge at the interface between invasion biology and evolutionary biology, using cutting-edge methods to phenotype widespread populations. This project will address key inter-related hypotheses of rapid adaptive evolution at temporal, spatial and phylogen ....Adaptive Morphology and Evolution of Invasive Rabbits and Hares. This project aims to uncover the morphological variation that allows rapid adaptive evolution in two invasive species, the rabbit and hare. This project expects to generate new knowledge at the interface between invasion biology and evolutionary biology, using cutting-edge methods to phenotype widespread populations. This project will address key inter-related hypotheses of rapid adaptive evolution at temporal, spatial and phylogenetic scales, particularly about changing morphologies involved role in locomotion and dispersal ability. Expected outcomes of this project include a comprehensive phenotypic database of these two species and identifying how these invasive species are adapting to the Australian landscape.Read moreRead less
Continuous tooth replacement in mammals: revealing the fundamental processes in tooth generation and movement. This project will investigate how molar teeth are made in mammals by examining the nabarlek, or little rock-wallaby, which is one of a handful of mammals that is able to regenerate new molars throughout its life. These new teeth migrate through the bone in order to move into the correct position in the mouth. By investigating two well-studied organisms, the mouse and the tammar wallaby, ....Continuous tooth replacement in mammals: revealing the fundamental processes in tooth generation and movement. This project will investigate how molar teeth are made in mammals by examining the nabarlek, or little rock-wallaby, which is one of a handful of mammals that is able to regenerate new molars throughout its life. These new teeth migrate through the bone in order to move into the correct position in the mouth. By investigating two well-studied organisms, the mouse and the tammar wallaby, as well as the nabarlek itself, the developmental processes and genes involved in molar generation and movement will be revealed. This project will integrate findings in regenerative medicine, evolutionary biology, materials engineering and palaeontology to reveal the mechanisms and origins of this astounding capability.Read moreRead less
Using genetics to reconstruct the peopling and diversification of Sahul. A recent landmark study has revealed that people who first arrived on Sahul (the landmass connecting Australia with New Guinea) remained largely genetically isolated from subsequent migrations. However, there is still little known about the route(s) taken into Sahul, or how adaptation has shaped the enormous diversity now observed across Indigenous Australians and Papuans. This project aims to look at these issues by applyi ....Using genetics to reconstruct the peopling and diversification of Sahul. A recent landmark study has revealed that people who first arrived on Sahul (the landmass connecting Australia with New Guinea) remained largely genetically isolated from subsequent migrations. However, there is still little known about the route(s) taken into Sahul, or how adaptation has shaped the enormous diversity now observed across Indigenous Australians and Papuans. This project aims to look at these issues by applying phylogenetic and population genetic tools to the largest genetic dataset yet analysed from populations across Australia, New Guinea, and Island South East Asia. The outcomes of the project should reveal both the route(s) taken into Sahul and how adaptation has shaped the diversity now observed in descendants of the colonisation.Read moreRead less
Fire, air, water and earth: Using fossils to discover the evolution of Australia’s open vegetation. How Australia came to be dominated by open, tough-leaved vegetation is an old but still highly controversial question, especially with recent developments in molecular biology that challenge paradigms established from the fossil record. The project will test this new molecular paradigm with innovative use of characteristics of fossil leaves to identify the timing and drivers of the evolution of Au ....Fire, air, water and earth: Using fossils to discover the evolution of Australia’s open vegetation. How Australia came to be dominated by open, tough-leaved vegetation is an old but still highly controversial question, especially with recent developments in molecular biology that challenge paradigms established from the fossil record. The project will test this new molecular paradigm with innovative use of characteristics of fossil leaves to identify the timing and drivers of the evolution of Australia’s open vegetation. The integration of new and rigorous evidence derived from living and fossil plants will provide the clearest evidence yet for the origins of Australian environments. This has ramifications for understanding plant responses to past and future climate changes.Read moreRead less