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Novel approaches for structural and functional analysis of the protein complex COG, a tether that controls intra-Golgi trafficking. Production and engineering of proteins are key methodologies of the life sciences in general and biotechnology in particular. Our ability to produce and analyse protein-based components of the cell determines the expense and speed of discovery, as well as the creation of new vaccines, drugs, and diagnostic methods. The current project aims to develop new approaches ....Novel approaches for structural and functional analysis of the protein complex COG, a tether that controls intra-Golgi trafficking. Production and engineering of proteins are key methodologies of the life sciences in general and biotechnology in particular. Our ability to produce and analyse protein-based components of the cell determines the expense and speed of discovery, as well as the creation of new vaccines, drugs, and diagnostic methods. The current project aims to develop new approaches for protein production and to apply them to the analysis of the basic mechanisms of cell self-maintenance.Read moreRead less
NmlR-dependent thiol-based redox systems and their role in global stress responses in bacteria. All cells sense changes to their environment and respond by altering their metabolism. A major environmental change is oxidative stress which damages cells. Cells have the ability to sense oxidative stress and alter metabolic processes to defend against the damage that it elicits. This proposal will characterize a novel oxidative stress defense system that is found in a number of bacterial pathogens t ....NmlR-dependent thiol-based redox systems and their role in global stress responses in bacteria. All cells sense changes to their environment and respond by altering their metabolism. A major environmental change is oxidative stress which damages cells. Cells have the ability to sense oxidative stress and alter metabolic processes to defend against the damage that it elicits. This proposal will characterize a novel oxidative stress defense system that is found in a number of bacterial pathogens that need to defend themselves against attack by the host. The project may identify new ways to manage these bacterial pathogens. It may also provide an insight into oxidative stress defense processes that are linked to pathologies in humans.Read moreRead less
The role of human single stranded DNA binding protein 1 in the repair of stalled DNA replication forks. It is vital that human cells protect their genetic code in order to prevent cancer. This project will look at how cells do this, with the aim of finding new ways to protect us from cancer.
Innovative Approaches to Membrane Protein Crystallography & Drug Discovery. Membrane proteins make up around 30% of the predicted products from our human genome, are critical for life, and represent the targets of biological agents like hormones and toxins as well as most drugs. Yet these proteins have persistently defied our best efforts to study them: we know very little about what they do or what they look like. This project is aimed at cracking the problem of membrane proteins, while at the ....Innovative Approaches to Membrane Protein Crystallography & Drug Discovery. Membrane proteins make up around 30% of the predicted products from our human genome, are critical for life, and represent the targets of biological agents like hormones and toxins as well as most drugs. Yet these proteins have persistently defied our best efforts to study them: we know very little about what they do or what they look like. This project is aimed at cracking the problem of membrane proteins, while at the same time developing screening methods that can be used to design drugs against them. The long-term benefits to the community will include fundamental new knowledge and the development of new technologies and pharmaceuticals.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0560906
Funder
Australian Research Council
Funding Amount
$578,145.00
Summary
Queensland High Throughput Confocal Cell Imaging facility. Interpretation of the huge amount of molecular information available from the rapid advances in genomics and proteomics now requires new high throughput technologies to examine cellular function. This proposal is for a high throughput fluorescent confocal microscopic imaging facility that can be applied in the fields of drug discovery, cell biology and toxicology. This facility allows the study of cell function, cell structure, and prote ....Queensland High Throughput Confocal Cell Imaging facility. Interpretation of the huge amount of molecular information available from the rapid advances in genomics and proteomics now requires new high throughput technologies to examine cellular function. This proposal is for a high throughput fluorescent confocal microscopic imaging facility that can be applied in the fields of drug discovery, cell biology and toxicology. This facility allows the study of cell function, cell structure, and protein expression in multi-well format, providing analyses at a speed and scale not formerly possible. This confocal imaging facility will add to the other high throughput systems for analysis of cell physiology currently established at Griffith University.Read moreRead less
The structural biology of light capture: A molecular resolution 3D atlas of the photosynthetic machinery. This project underpins the development of carbon dioxide (CO2)-neutral fuels for the future. Fuels account for around sixty seven percent of the global energy market. The Solar-Biofuels Consortium (www.solarbiofuels.org) is targeting this market by developing high efficiency second generation microalgal biofuel systems for the production of bio-diesel, bio-methane and bio-hydrogen (shown on ....The structural biology of light capture: A molecular resolution 3D atlas of the photosynthetic machinery. This project underpins the development of carbon dioxide (CO2)-neutral fuels for the future. Fuels account for around sixty seven percent of the global energy market. The Solar-Biofuels Consortium (www.solarbiofuels.org) is targeting this market by developing high efficiency second generation microalgal biofuel systems for the production of bio-diesel, bio-methane and bio-hydrogen (shown on Catalyst 2007). The solar-powered microalgal bioreactors can be located on non-arable land (eliminating competition with food production) and be coupled to carbon sequestration. Closed systems also minimize water use. This technology differs from most others (that is, clean-coal, nuclear, solar, wind, geothermal) as these target the electricity market.Read moreRead less
Development of New Generation Magnetic Circular Dichroism Spectrometers. We are building two Magnetic Circular Dichroism (MCD spectrometers) to meet a rising need in the study of metallo-proteins and other molecules of biological interest. The PhD project described in this application will involve instrumentation design, interfacing and sampling handling development for biological samples. We wish to involve a Lastek, a scientific instrumentation company, in the possible commercial development o ....Development of New Generation Magnetic Circular Dichroism Spectrometers. We are building two Magnetic Circular Dichroism (MCD spectrometers) to meet a rising need in the study of metallo-proteins and other molecules of biological interest. The PhD project described in this application will involve instrumentation design, interfacing and sampling handling development for biological samples. We wish to involve a Lastek, a scientific instrumentation company, in the possible commercial development of aspects of this project.Read moreRead less
The protein import machinery of peroxisomes. The peroxisome is a subcellular organelle essential for cellular metabolism. Our understanding of the formation, or biogenesis, of the peroxisome has advanced to the stage where many of the proteins involved in this process have been identified. What is less clear is how these proteins interact to form functional macromolecular complexes in the cell. In this project we will use biochemical approaches to isolate protein complexes involved in peroxisome ....The protein import machinery of peroxisomes. The peroxisome is a subcellular organelle essential for cellular metabolism. Our understanding of the formation, or biogenesis, of the peroxisome has advanced to the stage where many of the proteins involved in this process have been identified. What is less clear is how these proteins interact to form functional macromolecular complexes in the cell. In this project we will use biochemical approaches to isolate protein complexes involved in peroxisome biogenesis. These studies will help to elucidate the molecular mechanisms of peroxisome biogenesis and contribute to an understanding of organelle biogenesis generally.Read moreRead less
Proteomics Analysis of Interactions Between Chaperonin 10 and Cell Surface Proteins. Specific interactions at the cell surface may induce downstream biological responses. In the case of chaperonin 10, Cpn10, interaction at the cell surface results in immunomodulation of the inflammatory response. Cell surface proteins that interact with Cpn10 have not been identified. This project will use chemical crosslinking and proteomic techniques to identify cell surface proteins that interact with Cpn10 a ....Proteomics Analysis of Interactions Between Chaperonin 10 and Cell Surface Proteins. Specific interactions at the cell surface may induce downstream biological responses. In the case of chaperonin 10, Cpn10, interaction at the cell surface results in immunomodulation of the inflammatory response. Cell surface proteins that interact with Cpn10 have not been identified. This project will use chemical crosslinking and proteomic techniques to identify cell surface proteins that interact with Cpn10 and structural features of Cpn10 involved in these interactions. These findings will providde leads for the development of immunomodulatory therapeutics based on Cpn10 interactions. Analytical technologies will be developed that are applicable to other interacting protein systems.Read moreRead less
Structural studies on carbohydrate modifying enzymes. Carbohydrates form one of four major classes of biological macromolecules, and are major targets for drug design. We have developed methods for the production of carbohydrate synthesising enzymes and will determine the structures of these enzymes to provide the foundation for structure based design of inhibitors. The research will allow us to understand how these enzymes function in normal circumstances and how they malfunction in disease sta ....Structural studies on carbohydrate modifying enzymes. Carbohydrates form one of four major classes of biological macromolecules, and are major targets for drug design. We have developed methods for the production of carbohydrate synthesising enzymes and will determine the structures of these enzymes to provide the foundation for structure based design of inhibitors. The research will allow us to understand how these enzymes function in normal circumstances and how they malfunction in disease states such as cancer. The long-term outcome will be a significantly enhanced body of knowledge of this poorly understood group of enzymes and the development of new carbohydrate based chemicals with novel therapeutic applications.Read moreRead less