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Revealing the determinants of viral emergence and evolution in fish. Viral diseases pose an ongoing threat to Australian aquaculture. The devastating impact of emerging viruses makes it imperative to understand the factors that allow them to evolve and infect new hosts. We will address these key issues by revealing the diversity, abundance and evolution of viruses in fish sampled along the Australian east coast. The data generated will reveal the untapped biodiversity of fish viruses, the freque ....Revealing the determinants of viral emergence and evolution in fish. Viral diseases pose an ongoing threat to Australian aquaculture. The devastating impact of emerging viruses makes it imperative to understand the factors that allow them to evolve and infect new hosts. We will address these key issues by revealing the diversity, abundance and evolution of viruses in fish sampled along the Australian east coast. The data generated will reveal the untapped biodiversity of fish viruses, the frequency which they jump species boundaries and the determinants of this process, and how they are impacted by host ecology, including whether fish viruses follow a latitudinal gradient in diversity. The data generated will transform our understanding of fish viruses and identify those most likely to impact aquaculture.Read moreRead less
Co-divergence or opportunism: the evolution of trematode parasitism in the sea. This proposal is for fundamental research into how a major group of parasites (trematodes) has evolved in interaction with its hosts. The work is mainly the kind of 'basic science' that underpins other science without having intended immediate community benefit. However, the work depends strongly on the important task of developing better knowledge of trematodes in Australian native animals. Some of these parasite ....Co-divergence or opportunism: the evolution of trematode parasitism in the sea. This proposal is for fundamental research into how a major group of parasites (trematodes) has evolved in interaction with its hosts. The work is mainly the kind of 'basic science' that underpins other science without having intended immediate community benefit. However, the work depends strongly on the important task of developing better knowledge of trematodes in Australian native animals. Some of these parasites are pathogens of bivalves (scallops, giant clams and oysters) but almost nothing is known about them here. Another benefit of the study is in the training of several postgraduate students who will be able to contribute to the further study and management of parasites in Australia.Read moreRead less
Phylogeny and radiation of flatworm ectoparasites from marine fish using morphology and genetics, with novel approaches to identify pathogenic species. Fish flukes (flatworm parasites) with direct lifecycles can weaken and kill captive fish and threaten lucrative industries like finfish aquaculture and public aquaria in Australia and globally. Traditional approaches and molecular techniques will identify monogenean flukes in a family containing known pathogenic species distributed worldwide. K ....Phylogeny and radiation of flatworm ectoparasites from marine fish using morphology and genetics, with novel approaches to identify pathogenic species. Fish flukes (flatworm parasites) with direct lifecycles can weaken and kill captive fish and threaten lucrative industries like finfish aquaculture and public aquaria in Australia and globally. Traditional approaches and molecular techniques will identify monogenean flukes in a family containing known pathogenic species distributed worldwide. Knowledge of fish disease is paramount for quarantine, risk assessments for import/export and for managing pathogen outbreaks in aquaculture. Benefits include: economic/social improvements in regional/rural Australia where fish farms are expanding; international excellence and core research training in fish parasitology; profitable, exportable expertise; knowledge of endemic and shared pathogens.Read moreRead less
Female fluids in post-copulatory sexual selection. This project aims to test the causes, consequences and mechanisms of female reproductive fluids in modulating fertilisation bias in a model vertebrate species, the zebrafish. Female reproductive fluids (the fluid surrounding eggs) may moderate sperm selection by females, thus facilitating mate choice at the gamete level. This project will study interactions involving sperm and female reproductive fluid in an evolutionary framework. The intended ....Female fluids in post-copulatory sexual selection. This project aims to test the causes, consequences and mechanisms of female reproductive fluids in modulating fertilisation bias in a model vertebrate species, the zebrafish. Female reproductive fluids (the fluid surrounding eggs) may moderate sperm selection by females, thus facilitating mate choice at the gamete level. This project will study interactions involving sperm and female reproductive fluid in an evolutionary framework. The intended outcome is increased knowledge of these processes, and better understanding of how non-gamete factors affect fertility, which could benefit fields as diverse as human fertility and aquaculture.Read moreRead less
Linkages between productivity and consistent behavioural traits in fish: implications for harvesting, climate impacts, and selective breeding for aquaculture. The extent to which behavior, growth and reproduction are genetically linked in fish populations is unknown, but critical for predicting the impacts of fish harvesting and climate warming, and developing fish stains for aquaculture. If strongly linked, fish harvest will always remove aggressive, large and productive fish, requiring their p ....Linkages between productivity and consistent behavioural traits in fish: implications for harvesting, climate impacts, and selective breeding for aquaculture. The extent to which behavior, growth and reproduction are genetically linked in fish populations is unknown, but critical for predicting the impacts of fish harvesting and climate warming, and developing fish stains for aquaculture. If strongly linked, fish harvest will always remove aggressive, large and productive fish, requiring their protection; in aquaculture, selecting for productive fish will also increase aggression-related injuries. If not strongly linked, we may be able to select for high productivity and low aggression in fish, or high productivity and low metabolism, thus reducing feed costs in aquaculture associated with aggressive behaviour leading to injury and infection, and reduced growth at warmer temperatures.Read moreRead less
Evolutionary origin of stem cells and the emergence of animal complexity. The project aims to decipher the fundamental mechanisms governing stem cell specification and formation. All animals rely on stem cells to replenish, repair and regenerate tissues. Stem cells are also often a conduit to malignant tumours. This project seeks to uncover the rules governing stem cell formation through the study of a simple and ancient animal – the marine sponge Amphimedon queenslandica. The project plans to c ....Evolutionary origin of stem cells and the emergence of animal complexity. The project aims to decipher the fundamental mechanisms governing stem cell specification and formation. All animals rely on stem cells to replenish, repair and regenerate tissues. Stem cells are also often a conduit to malignant tumours. This project seeks to uncover the rules governing stem cell formation through the study of a simple and ancient animal – the marine sponge Amphimedon queenslandica. The project plans to combine insights from the simple, experimentally-tractable sponge stem cell system with existing knowledge of stem cell specification in humans and other animals, to reveal the essential features of stem cell formation. These insights may inform future pursuits to generate, control and use stem cells in cancer and regenerative medicines.Read moreRead less
Expanding gene-environment causality in evolutionary genetics. This project aims to investigate how environmental experiences shape phenotypes, engender variance in populations and ultimately contribute to evolution. It targets new discoveries for how environmental effects can multiply throughout ontogeny and/or propagate across generations. Although widely speculated to support new evolutionary paradigms, such knowledge lacks scrutiny according to the formal metric of quantitative genetics. Thi ....Expanding gene-environment causality in evolutionary genetics. This project aims to investigate how environmental experiences shape phenotypes, engender variance in populations and ultimately contribute to evolution. It targets new discoveries for how environmental effects can multiply throughout ontogeny and/or propagate across generations. Although widely speculated to support new evolutionary paradigms, such knowledge lacks scrutiny according to the formal metric of quantitative genetics. This project seeks to expose guppy pedigrees to unique manipulations and reconcile adaptive evolution across captive and wild populations. The outcome is expected to address knowledge gaps in the life and human sciences and potentially inform goals in primary production and conservation.Read moreRead less