Development of cloning technology for the Australian Pig Industry. Cloning has the potential to be the most efficient of the reproductive technologies developed for increasing genetic improvement in livestock. Currently up to 5% of cloned embryos develop to term in the pig. This is higher than that reported for cattle and sheep. Moreover the use of this technology in the pig does not appear not to result in the same sorts of problems and losses seen around the time of birth in these species ....Development of cloning technology for the Australian Pig Industry. Cloning has the potential to be the most efficient of the reproductive technologies developed for increasing genetic improvement in livestock. Currently up to 5% of cloned embryos develop to term in the pig. This is higher than that reported for cattle and sheep. Moreover the use of this technology in the pig does not appear not to result in the same sorts of problems and losses seen around the time of birth in these species i.e. the majority of cloned pigs appear normal and are healthy at birth. However before cloning can be used commercially, current efficiencies need to be increased approx two fold for this to be economically viable. The aim of the present study is to improve the efficiency of our current cloning protocol and develop associated technologies such as embryo freezing to facilitate commercialisation. This will ensure that the Australian Pig Industry remains competitive at a pivotal time in its development.Read moreRead less
Marker assisted selection of honey bees. The project will develop new molecular markers for commercially relevant trait of honey bees and ways of using these to implement marker-assisted selection for honey bee genetic improvement. Beekeepers need to use genetically improved stock to remain competitive. Honey production needs to be improved, and new ways of identifying disease resistant bees are needed. Unfortunately, breeding bees is very difficult. This project will use modern molecular gen ....Marker assisted selection of honey bees. The project will develop new molecular markers for commercially relevant trait of honey bees and ways of using these to implement marker-assisted selection for honey bee genetic improvement. Beekeepers need to use genetically improved stock to remain competitive. Honey production needs to be improved, and new ways of identifying disease resistant bees are needed. Unfortunately, breeding bees is very difficult. This project will use modern molecular genetic techniques to help find new efficient ways to breed better bees. The benefits will be a more viable beekeeping sector, a keystone industry that provides pollination services essential to many horticultural industriesRead moreRead less
Breeding super black soldier flies at scale for sustainable food production. This project aims to address the current challenges impeding the industrial scale-up of Australian Black Soldier Fly (BSF) farming across diverse feed waste substrates by generating critical on-farm knowledge. This project expects to generate fundamental knowledge in commercial BSF breeding designs whilst also developing and testing new animal evaluation technologies (ie, genetic & spectroscopy) through interdisciplinar ....Breeding super black soldier flies at scale for sustainable food production. This project aims to address the current challenges impeding the industrial scale-up of Australian Black Soldier Fly (BSF) farming across diverse feed waste substrates by generating critical on-farm knowledge. This project expects to generate fundamental knowledge in commercial BSF breeding designs whilst also developing and testing new animal evaluation technologies (ie, genetic & spectroscopy) through interdisciplinary approaches that will accelerate industry productivity. Expected outcomes of this project include the long-term growth and competitive advantage of the Australian insect farming industry, as well as promoting the benefits of a circular economy through bioconversion of organic waste into commercially viable products.Read moreRead less
Enhancing the efficiency of equine reproduction: relevant to the Thoroughbred and Standardbred breeding industries. The purpose of this project is to link the equine breeding industry with a major centre of reproductive research at the University of Newcastle. By creating this unique nexus, major efficiency gains will be achieved for this industry that will not only secure its international competitiveness but also significantly enhance its profitability.
Breeding for the future - Alpaca genetics. The Australian alpaca industry is recognised as an international leader. Alpaca fleece provides an annual national economic benefit of $1 million and has enormous potential for growth. This project will use a novel molecular mapping approach to generate a genetic test for desirable Suri fleece - the single biggest factor in developing a purebreeding suri line whilst retaining variation in other traits and avoiding inbreeding. This will quickly increase ....Breeding for the future - Alpaca genetics. The Australian alpaca industry is recognised as an international leader. Alpaca fleece provides an annual national economic benefit of $1 million and has enormous potential for growth. This project will use a novel molecular mapping approach to generate a genetic test for desirable Suri fleece - the single biggest factor in developing a purebreeding suri line whilst retaining variation in other traits and avoiding inbreeding. This will quickly increase the industry value, providing opportunity for rural communities to diversify farming enterprises and maximise income, and offering further employment in regional areas. This project will ensure Australian breeders retain a competitive edge in the face of alpaca research beginning in the USA. Read moreRead less
Novel genomic technologies to improve fertility in northern beef cattle. This project aims to develop new genomic technologies to enable accelerated improvement of cow fertility. Increased global demand for beef is driving northern Australian beef enterprises to develop innovative ways to increase productivity. A substantial industry challenge is poor fertility of cows, with weaning rates frequently less than 40%. The expected outcomes of this project are an improvement in weaning rates to enabl ....Novel genomic technologies to improve fertility in northern beef cattle. This project aims to develop new genomic technologies to enable accelerated improvement of cow fertility. Increased global demand for beef is driving northern Australian beef enterprises to develop innovative ways to increase productivity. A substantial industry challenge is poor fertility of cows, with weaning rates frequently less than 40%. The expected outcomes of this project are an improvement in weaning rates to enable accelerated genetic gain for fertility in these enterprises by delivering a low cost array, which assays thousands of DNA variants affecting fertility simultaneously. This should provide significant benefits such as a new genomic prediction method informed by gene expression data from a unique resource of Brahman cattle with exceptionally high fertility, generating significant industry benefits.Read moreRead less
Advanced animal breeding in aquaculture: using genome-wide molecular breeding values for rapid animal improvement in the silver-lipped pearl oyster. The primary impediment to achieving rapid genetic progress in aquaculture is an inability to accurately and rapidly identify high-performance animals for selection as parents in animal breeding programs. This project aims to develop an innovative genomic selection breeding system for the silver-lipped pearl oyster to overcome current limitations ass ....Advanced animal breeding in aquaculture: using genome-wide molecular breeding values for rapid animal improvement in the silver-lipped pearl oyster. The primary impediment to achieving rapid genetic progress in aquaculture is an inability to accurately and rapidly identify high-performance animals for selection as parents in animal breeding programs. This project aims to develop an innovative genomic selection breeding system for the silver-lipped pearl oyster to overcome current limitations associated with traditional animal improvement methods. The use of genomic selection will not only transform the Australian pearl oyster industry, but it will also showcase the potential of genomic selection in aquaculture globally. Furthermore, knowledge gained from this project can also be applied to a variety of other Australian aquaculture species to accelerate the uptake of this technology.Read moreRead less
Methods to infer dense genomic information from sparsely genotyped populations. Prediction of phenotype based on DNA polymorphisms or sequence has important applications such as prediction of disease risk in human medicine and prediction of genetic value in plant or animal breeding. This project will enhance precision and lower the cost of association studies leading to substantial increase in accuracy of such predictions. This will allow more effective genetic improvement, particularly of diff ....Methods to infer dense genomic information from sparsely genotyped populations. Prediction of phenotype based on DNA polymorphisms or sequence has important applications such as prediction of disease risk in human medicine and prediction of genetic value in plant or animal breeding. This project will enhance precision and lower the cost of association studies leading to substantial increase in accuracy of such predictions. This will allow more effective genetic improvement, particularly of difficult but important traits such as disease resistance, reduced green-house gas emissions and product quality. The same methods can be extended to improve genetic improvement in plants and better prediction of human disease risk. Read moreRead less
Increasing amphibian immunity to combat disease causing mass extinction. This project aims to increase amphibian survival to combat the devastating chytrid fungus by identifying resistance genes and increasing their frequency in the host population. The project is interdisciplinary and uses targeted genetic manipulation techniques developed for agriculture to improve disease resistance in wildlife for the first time. Expected outcomes include 1) enhanced international collaborations in comparati ....Increasing amphibian immunity to combat disease causing mass extinction. This project aims to increase amphibian survival to combat the devastating chytrid fungus by identifying resistance genes and increasing their frequency in the host population. The project is interdisciplinary and uses targeted genetic manipulation techniques developed for agriculture to improve disease resistance in wildlife for the first time. Expected outcomes include 1) enhanced international collaborations in comparative immunology, 2) a comprehensive understanding of immunity to chytridiomycosis, and 3) disease resistant amphibians. The anticipated benefit is ability to apply the optimal method to improve conservation of wildlife threatened by emerging disease, such as marker assisted selective breeding or genetic engineering.Read moreRead less