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Origin and evolution of animal-bacterial symbiosis. This project seeks to understand how interactions between animals and their microbial symbionts – the holobiont – evolved, and how they are influenced by the environment over an animal's life. Using a homegrown Australian model, a sea sponge from the Great Barrier Reef, and advanced multi-omic approaches (genomics plus cell biology), this project aims to uncover the mechanisms underlying the establishment and maintenance of the holobiont throug ....Origin and evolution of animal-bacterial symbiosis. This project seeks to understand how interactions between animals and their microbial symbionts – the holobiont – evolved, and how they are influenced by the environment over an animal's life. Using a homegrown Australian model, a sea sponge from the Great Barrier Reef, and advanced multi-omic approaches (genomics plus cell biology), this project aims to uncover the mechanisms underlying the establishment and maintenance of the holobiont through development, and under changing ecological and environmental conditions. Because of the evolutionary position of sponges, outcomes of this project expect to reveal cardinal rules governing animal-microbe interactions that are fundamental to the health and conservation of most animals and ecosystems.Read moreRead less
Statistical Methods for Next Generation Genome-Wide Association Studies. This project aims to develop cutting-edge statistical methods to analyse large genomic datasets and identify genetic variants associated with inter-individual differences in various human traits. Knowledge of trait-associated DNA variants is instrumental in understanding how natural selection has shaped human traits. By integrating genomic data from diverse and underrepresented populations, this project further expects to c ....Statistical Methods for Next Generation Genome-Wide Association Studies. This project aims to develop cutting-edge statistical methods to analyse large genomic datasets and identify genetic variants associated with inter-individual differences in various human traits. Knowledge of trait-associated DNA variants is instrumental in understanding how natural selection has shaped human traits. By integrating genomic data from diverse and underrepresented populations, this project further expects to contribute to the equitable use of genomic technologies in humans, regardless of geographical origins. Expected outcomes of this research include novel analysis methods and software tools, which should broadly and significantly benefit gene discovery in other species, including those of agricultural relevance.Read moreRead less
Neural circuit control of effort under stress . This Project aims to investigate how the ‘decision’ to persist in exerting effort to obtain a reward is encoded in the the brain and affected by stress. This work will generate new knowledge on the neural mechanisms through which stress modifies neural activity to control decision making processes underpinning adaptive behaviours essential for survival. The expected outcomes of this work include enhanced capacity at the interface of behavioural a ....Neural circuit control of effort under stress . This Project aims to investigate how the ‘decision’ to persist in exerting effort to obtain a reward is encoded in the the brain and affected by stress. This work will generate new knowledge on the neural mechanisms through which stress modifies neural activity to control decision making processes underpinning adaptive behaviours essential for survival. The expected outcomes of this work include enhanced capacity at the interface of behavioural and computational neuroscience, that will in turn provide significant benefits through greater insight into brain functions essential for survival, with long ranging implications for performance optimisation and brain-inspired computing. Read moreRead less
Australian Laureate Fellowships - Grant ID: FL230100100
Funder
Australian Research Council
Funding Amount
$3,300,000.00
Summary
Forces in Nature: Tissue mechanics and cell sociology. Epithelial cells cover surfaces in the body, forming a shield to protect us from the environment. Despite their importance, we understand poorly how the cells communicate. This project aims to test the novel concept that epithelial cells communicate via transmission and detection of mechanical forces, using an innovative combination of cellular and biophysical experiments and physical theory. The expected outcomes are new knowledge, interdis ....Forces in Nature: Tissue mechanics and cell sociology. Epithelial cells cover surfaces in the body, forming a shield to protect us from the environment. Despite their importance, we understand poorly how the cells communicate. This project aims to test the novel concept that epithelial cells communicate via transmission and detection of mechanical forces, using an innovative combination of cellular and biophysical experiments and physical theory. The expected outcomes are new knowledge, interdisciplinary training for young scientists, new national research capacity and growing international collaborations. Benefits include enhancing Australia’s scientific linkages and research capacity and providing fundamental knowledge that could lead to future advances in bioengineering and drug discovery. Read moreRead less
Australia’s first Green Biopharm . Protein-based medicines and vaccines represent the fastest growing sector of the pharmaceutical market, but their production by Australian small and medium enterprises is prohibited by the high infrastructure and operating costs of traditional manufacturing systems. This project aims to develop advanced methods to produce protein-based medicines using a native plant. The power of this technology will be demonstrated by making a biologic anti-parasite treatment, ....Australia’s first Green Biopharm . Protein-based medicines and vaccines represent the fastest growing sector of the pharmaceutical market, but their production by Australian small and medium enterprises is prohibited by the high infrastructure and operating costs of traditional manufacturing systems. This project aims to develop advanced methods to produce protein-based medicines using a native plant. The power of this technology will be demonstrated by making a biologic anti-parasite treatment, as an alternative to outdated chemical treatments. Expected outcomes include a unique scalable technology which will support Australia's sovereign capacity to produce high-value proteins, rapidly, affordably, and at scale, and with less complexity than current plant-based systems. Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE240101231
Funder
Australian Research Council
Funding Amount
$411,837.00
Summary
Quinoid Polymers for Organic Electrochemical Transistors and Bioelectronics. This project aims to develop organic semiconductors (OSCs) with excellent mechanical flexibility and biocompatibility to exploit their potentials in bioelectronics. It connects the electronic world with ionic world of biology to push the biomedical application of OSCs a big step forward. Interdisciplinary knowledge, intellectual properties (IPs), top-notch publications, invited talks, and international collaborations ar ....Quinoid Polymers for Organic Electrochemical Transistors and Bioelectronics. This project aims to develop organic semiconductors (OSCs) with excellent mechanical flexibility and biocompatibility to exploit their potentials in bioelectronics. It connects the electronic world with ionic world of biology to push the biomedical application of OSCs a big step forward. Interdisciplinary knowledge, intellectual properties (IPs), top-notch publications, invited talks, and international collaborations are expected. Additionally, it will earn Australia a commercial lead in the biomedical sector to attract more talents to serve Australia. This project also matches well with several government’s strategic research priorities, attracting industries to realise IPs transfer to bring “great value for money” to feed back Australia.Read moreRead less
Understanding specificity and flexibility in coral symbioses. This project aims to understand why some corals can switch algal partners while others remain faithful to a single strain. This is important because corals depend on their symbiotic algal partners for survival and because some algae provide greater resilience to environmental stress than others. This project will greatly enhance our understanding of the molecular and physiological factors governing flexibility and specificity in coral ....Understanding specificity and flexibility in coral symbioses. This project aims to understand why some corals can switch algal partners while others remain faithful to a single strain. This is important because corals depend on their symbiotic algal partners for survival and because some algae provide greater resilience to environmental stress than others. This project will greatly enhance our understanding of the molecular and physiological factors governing flexibility and specificity in coral-algal symbioses. It will provide much-needed knowledge required to identify associations most appropriate for specific conditions, prioritise populations for conservation, and assess the feasibility of new approaches to managing and restoring coral reefs.
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Discovery Early Career Researcher Award - Grant ID: DE240100128
Funder
Australian Research Council
Funding Amount
$450,000.00
Summary
Engineering microenvironments to regulate osteocyte 3D networks in vitro. Most knowledge of bone is based on only a fraction of cells found in bone because the majority of cells in our bones (called osteocyte cell networks) cannot easily be grown or studied outside the body. This results in the inability to understand how the bone organ functions. Using bioinspired engineering, this project will use advanced biomaterials to biofabricate, for the first time, osteocyte cell networks in vitro. By u ....Engineering microenvironments to regulate osteocyte 3D networks in vitro. Most knowledge of bone is based on only a fraction of cells found in bone because the majority of cells in our bones (called osteocyte cell networks) cannot easily be grown or studied outside the body. This results in the inability to understand how the bone organ functions. Using bioinspired engineering, this project will use advanced biomaterials to biofabricate, for the first time, osteocyte cell networks in vitro. By unravelling how they are formed and controlled by manipulating their microenvironment, we will discover how different types of bones are formed. The benefits will be a valuable tool for the bone research community, allowing unresolved questions to be addressed in the future, such as how bone forms, repairs, and remodels.Read moreRead less
Unlocking the potential of bacterial polymers by defining key determinants. Sugary structures that coat the surface of some bacteria, known as capsules, can be modified by bacterial viruses (bacteriophage) in the environment. For the bacterial genus Acinetobacter, this influences their use as naturally renewable 'green' biopolymers for remediating environments contaminated with petroleum hydrocarbons. This project aims to characterise crucial capsule polymerase enzymes using a combination of bio ....Unlocking the potential of bacterial polymers by defining key determinants. Sugary structures that coat the surface of some bacteria, known as capsules, can be modified by bacterial viruses (bacteriophage) in the environment. For the bacterial genus Acinetobacter, this influences their use as naturally renewable 'green' biopolymers for remediating environments contaminated with petroleum hydrocarbons. This project aims to characterise crucial capsule polymerase enzymes using a combination of bioinformatics and experimental methodologies to establish how bacteriophage influence Acinetobacter capsules. Outcomes include the development of an innovative genomics pipeline to detect capsule change, improving the use of living bacteria for bioremediation and sustainable rehabilitation of natural ecosystems.Read moreRead less
Understanding prokaryotic small proteins from context. Prokaryotic small proteins are increasingly recognised to play important biological roles but have been largely overlooked due to the lack of adequate tools to study them. This project aims to develop new methods to identify and predict the functions of small proteins from microbial communities by studying sequence patterns in their genomes. These predicted functions will be confirmed in the laboratory, leading to a catalogue of newly charac ....Understanding prokaryotic small proteins from context. Prokaryotic small proteins are increasingly recognised to play important biological roles but have been largely overlooked due to the lack of adequate tools to study them. This project aims to develop new methods to identify and predict the functions of small proteins from microbial communities by studying sequence patterns in their genomes. These predicted functions will be confirmed in the laboratory, leading to a catalogue of newly characterised small proteins from a diverse range of habitats and geographies. By creating new ways to study the role of small proteins in the global microbiome, we will provide the foundational knowledge required to leverage these proteins for use in biotechnology. Read moreRead less