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Linkages between productivity and consistent behavioural traits in fish: implications for harvesting, climate impacts, and selective breeding for aquaculture. The extent to which behavior, growth and reproduction are genetically linked in fish populations is unknown, but critical for predicting the impacts of fish harvesting and climate warming, and developing fish stains for aquaculture. If strongly linked, fish harvest will always remove aggressive, large and productive fish, requiring their p ....Linkages between productivity and consistent behavioural traits in fish: implications for harvesting, climate impacts, and selective breeding for aquaculture. The extent to which behavior, growth and reproduction are genetically linked in fish populations is unknown, but critical for predicting the impacts of fish harvesting and climate warming, and developing fish stains for aquaculture. If strongly linked, fish harvest will always remove aggressive, large and productive fish, requiring their protection; in aquaculture, selecting for productive fish will also increase aggression-related injuries. If not strongly linked, we may be able to select for high productivity and low aggression in fish, or high productivity and low metabolism, thus reducing feed costs in aquaculture associated with aggressive behaviour leading to injury and infection, and reduced growth at warmer temperatures.Read moreRead less
3D Structure determination of biomacromolecular assemblies from sparse data. This project has direct impact on pharmaceutical research: Biomacromolecular interactions are key points for pharmaceutical intervention and detailed structural knowledge of dynamic protein interactions can significantly accelerate drug development. Australia has invested in expensive instrumentation that can be used with new laboratory methods to obtain information on delicately balanced biomacromolecular interactions, ....3D Structure determination of biomacromolecular assemblies from sparse data. This project has direct impact on pharmaceutical research: Biomacromolecular interactions are key points for pharmaceutical intervention and detailed structural knowledge of dynamic protein interactions can significantly accelerate drug development. Australia has invested in expensive instrumentation that can be used with new laboratory methods to obtain information on delicately balanced biomacromolecular interactions, and how they malfunction in disease. This project will provide a computational framework to increase the impact of this investment by integrating measurements from a range of novel technologies and developing understanding of changes in structure of large protein complexes in different functional states.Read moreRead less
Quantifying the Tree of Life's Diversity with the Paleobiology Database. The Paleobiology Database is the Internet's key source of scientific data on the fossil record. It records names and classification of fossil organisms and the ages, locations, and environments of the places that yield these fossils. It has often been used to estimate the number of species existing at different points in geological time. Macquarie will house the Database as it is expanded to record evolutionary relations ....Quantifying the Tree of Life's Diversity with the Paleobiology Database. The Paleobiology Database is the Internet's key source of scientific data on the fossil record. It records names and classification of fossil organisms and the ages, locations, and environments of the places that yield these fossils. It has often been used to estimate the number of species existing at different points in geological time. Macquarie will house the Database as it is expanded to record evolutionary relationships of many species. This information will help to estimate dates of origination for major groups such as mammals and birds. It will also help to show whether mass extinctions tend to target old groups with few surviving species, which will help to predict which groups will survive the current mass extinction.Read moreRead less
The genetics of resistance to devil facial tumour disease. Tasmanian devils are on the brink of extinction due to a new contagious cancer: Devil Facial Tumour Disease (DFTD). The aim of this project is to determine the genetic nature of DFTD resistance in order to directly contribute to the conservation management of this iconic and ecologically important species. This research will generate fundamental information about genetic diversity in Tasmanian devils and establish the feasibility of bree ....The genetics of resistance to devil facial tumour disease. Tasmanian devils are on the brink of extinction due to a new contagious cancer: Devil Facial Tumour Disease (DFTD). The aim of this project is to determine the genetic nature of DFTD resistance in order to directly contribute to the conservation management of this iconic and ecologically important species. This research will generate fundamental information about genetic diversity in Tasmanian devils and establish the feasibility of breeding resistant animals for release into the wild. Read moreRead less
Fragment Based Screening for new Antibiotics by Protein X-Ray Crystallography. Due in part to rising levels of antibiotic resistance, the death toll from pathogenic bacteria is expected to skyrocket over the next 15 years. There is therefore a pressing need for new antibiotics to treat bacterial infection. This project will use a relatively new discovery tool called fragment based screening to discover a new generation of antibacterial agents. This tool will allow for the rapid economical discov ....Fragment Based Screening for new Antibiotics by Protein X-Ray Crystallography. Due in part to rising levels of antibiotic resistance, the death toll from pathogenic bacteria is expected to skyrocket over the next 15 years. There is therefore a pressing need for new antibiotics to treat bacterial infection. This project will use a relatively new discovery tool called fragment based screening to discover a new generation of antibacterial agents. This tool will allow for the rapid economical discovery of new drugs, and will complement other investments in Australian biotechnology infrastructure.Read moreRead less
Comparative Biogeography of Australasian biota. Establishing an internationally recognised biogeographical research program will help scientists, policy makers and the public understand the past and future distribution patterns of the plants and animals of Australia. Discovering these patterns will help conservation biologists and government implement the right policies and practices to deal with biodiversity loss and climate change.
New statistical methods for identifying micro-ribonucleic acid (miRNA) regulatory networks. Understanding gene regulatory networks is critical in the understanding of fundamental biological systems. These networks have important implications for the discovery of fundamental mechanisms relating to the diagnosis and management of many illnesses. This research will provide new statistical methods to identify regulatory micro-ribonucleic acid modules and to understand their relationship in gene regu ....New statistical methods for identifying micro-ribonucleic acid (miRNA) regulatory networks. Understanding gene regulatory networks is critical in the understanding of fundamental biological systems. These networks have important implications for the discovery of fundamental mechanisms relating to the diagnosis and management of many illnesses. This research will provide new statistical methods to identify regulatory micro-ribonucleic acid modules and to understand their relationship in gene regulatory networks through multiple covariance estimation and multivariate classification techniques. My results should enable researchers to better understand the regulation underlying biological systems, leading to improved human health, medical and biological research outcomes.Read moreRead less