Genetics and evolution of Shigella O antigens. We use genome scale sequencing techniques to sequence 26 O-antigen gene clusters from Shigella. With the seven already known, this will give sequences for every O-antigen of Shigella. This will be the first time that such set is fully sequenced. Shigella are human specific pathogens, have emerged with the evolution of humans. O-antigens are important for their life and pathogenicity. This project will greatly extend our knowledge of the genetic basi ....Genetics and evolution of Shigella O antigens. We use genome scale sequencing techniques to sequence 26 O-antigen gene clusters from Shigella. With the seven already known, this will give sequences for every O-antigen of Shigella. This will be the first time that such set is fully sequenced. Shigella are human specific pathogens, have emerged with the evolution of humans. O-antigens are important for their life and pathogenicity. This project will greatly extend our knowledge of the genetic basis and evolution of this important polymorphism. O-antigens are used for typing Shigella and also elicit strong immunity. The molecular data will help establish DNA based typing and vaccine development.Read moreRead less
Special Research Initiatives - Grant ID: SR0354702
Funder
Australian Research Council
Funding Amount
$10,000.00
Summary
Australian Microbial Resources Research Network. The Australian Microbial Resources Research Network will provide integrated access to Australian collections of microorganisms and electronic access to bioinformation databases to meet national strategic needs for microbiological resources and to support the competitive development of the life sciences and biotechnology industries in Australia. The network will promote collaborative interactions and accelerate the discovery of Australian microorg ....Australian Microbial Resources Research Network. The Australian Microbial Resources Research Network will provide integrated access to Australian collections of microorganisms and electronic access to bioinformation databases to meet national strategic needs for microbiological resources and to support the competitive development of the life sciences and biotechnology industries in Australia. The network will promote collaborative interactions and accelerate the discovery of Australian microorganisms and microbial genomic information for innovative biotechnology and create new opportunities for bioindustries. The Network will link researchers and foster the discovery and exploitation of Australian microbial resources and make these resources and associated information available for applications in research, industry and education.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0453608
Funder
Australian Research Council
Funding Amount
$579,230.00
Summary
Multifunctional confocal laser scanning microscope with time resolved and two photon imaging and fluorescence correlation capabilities. We seek to establish an Australian first confocal laser scanning microscope with time resolved imaging and fluorescence correlation spectroscopy capabilities. Its advantages include ultrasensitive detection of weak fluorescent emissions against high autofluorescent background by using fluorescence lifetime signatures, with over three orders of magnitude discrimi ....Multifunctional confocal laser scanning microscope with time resolved and two photon imaging and fluorescence correlation capabilities. We seek to establish an Australian first confocal laser scanning microscope with time resolved imaging and fluorescence correlation spectroscopy capabilities. Its advantages include ultrasensitive detection of weak fluorescent emissions against high autofluorescent background by using fluorescence lifetime signatures, with over three orders of magnitude discrimination improvement. The system will also be able to monitor binding of single molecules. These techniques will open new and exciting avenues for interdisciplinary research at the frontier between biological and physical sciences. The microscope will operate within an existing multi-user Optical Characterisation Facility supporting research of an established network of scientists in the Sydney area.Read moreRead less
Mechanisms of action and expression of bioactive compounds produced by the surface associated marine bacterium Pseudoalteromonas tunicata. The marine surface-associated bacterium Pseudoalteromonas tunicata produces a number of bioactive metabolites that inhibit the colonisation and growth of common fouling organisms such as bacteria, fungi, algae and invertebrate larvae. The antibacterial and antifungal compounds represent novel metabolites active against a remarkable range of both medically and ....Mechanisms of action and expression of bioactive compounds produced by the surface associated marine bacterium Pseudoalteromonas tunicata. The marine surface-associated bacterium Pseudoalteromonas tunicata produces a number of bioactive metabolites that inhibit the colonisation and growth of common fouling organisms such as bacteria, fungi, algae and invertebrate larvae. The antibacterial and antifungal compounds represent novel metabolites active against a remarkable range of both medically and agriculturally important bacteria and fungi. This project aims to explore the identity, mode of action and regulation of expression of these compounds. This research proposal addresses several significant biological concepts and will lead to the development of novel environmentally friendly antifouling and antimicrobial technologies.Read moreRead less
Functional drug-releasing polymer nano-composites for preventing medical device infection and encrustation. By developing new methodologies for producing functional biomaterials, this research will benefit Australia by continuing our high profile in this research field and by producing economic benefits arising from development and export of materials technologies to the major user groups in USA and Europe. With our demonstrated linkages with Australian based biomaterials developers at CSIRO an ....Functional drug-releasing polymer nano-composites for preventing medical device infection and encrustation. By developing new methodologies for producing functional biomaterials, this research will benefit Australia by continuing our high profile in this research field and by producing economic benefits arising from development and export of materials technologies to the major user groups in USA and Europe. With our demonstrated linkages with Australian based biomaterials developers at CSIRO and University of Queensland, as well as with companies involved in the commercialisation of polyurethane based medical devices (Aortech P/L), this group is well placed to continue the research at a more applied level once the early basic stage is complete.Read moreRead less
Microfluidic device for microbial separation and concentration. This project will enhance Australia's capabilities and presence in the rapidly expanding field of chemical and biological analysis systems on a chip. We will develop and build handheld devices for microbial concentration that will facilitate earlier and easier detection of potentially pathogenic organisms in critical situations such as epidemiological crises or forensics. The portability and ease of operation of our integrated micro ....Microfluidic device for microbial separation and concentration. This project will enhance Australia's capabilities and presence in the rapidly expanding field of chemical and biological analysis systems on a chip. We will develop and build handheld devices for microbial concentration that will facilitate earlier and easier detection of potentially pathogenic organisms in critical situations such as epidemiological crises or forensics. The portability and ease of operation of our integrated microfluidic devices and their increased resilience to blockages make them ideal for use in remote areas and non-laboratory settings. Application areas will include disease detection, microbial contamination in food industries and water quality monitoring.Read moreRead less
Enhancing Seagrass Restoration : Improving Hessian Durability in Marine Environments. The establishment of an environmentally benign method for restoration of seagrass beds (which provide habitat for a wide range of commercially, recreationally and ecologically important marine species) will enhance Australia's capability of maintaining its coastal marine environment in support of its fishing and ecotourism industries. Furthermore, it will ultimately improve our capacity to manage the environmen ....Enhancing Seagrass Restoration : Improving Hessian Durability in Marine Environments. The establishment of an environmentally benign method for restoration of seagrass beds (which provide habitat for a wide range of commercially, recreationally and ecologically important marine species) will enhance Australia's capability of maintaining its coastal marine environment in support of its fishing and ecotourism industries. Furthermore, it will ultimately improve our capacity to manage the environmental impact of human development on our natural resources. If successful, the knowledge gained of the dynamics of marine biofilms on differentially coated natural fibers could facilitate broader application of methods used in environmental restoration and marine based industries, and foreshadow new applications.Read moreRead less
Roles for quorum sensing and biofilm formation by Vibrio cholerae in resistance to protozoan grazing. This research will benefit Australia through an increased fundamental understanding of how our model bacterium, Vibrio cholerae, survives in the environment. This could lead to the development of strategies that control bacterial biofilms, a significant medical and industrial concern. This project will also be of benefit through the training of postgraduate students in environmental microbiology ....Roles for quorum sensing and biofilm formation by Vibrio cholerae in resistance to protozoan grazing. This research will benefit Australia through an increased fundamental understanding of how our model bacterium, Vibrio cholerae, survives in the environment. This could lead to the development of strategies that control bacterial biofilms, a significant medical and industrial concern. This project will also be of benefit through the training of postgraduate students in environmental microbiology and is expected to result in the publication and presentation of data in quality journals and conferences, which increases the profile of Australian science.Read moreRead less
Microbial community characterisation for bioprocessing of chlorinated hydrocarbon contaminated groundwater. Due to irresponsible industrial practices, Australia has hundreds of polluted soil and water environments. This includes the notorious groundwater contamination underlying Botany in Sydney, an area of rich industrial, residential and cultural significance. The use of microbes to clean up polluted environments, such as the Botany groundwater, is known as bioremediation - a process exploitin ....Microbial community characterisation for bioprocessing of chlorinated hydrocarbon contaminated groundwater. Due to irresponsible industrial practices, Australia has hundreds of polluted soil and water environments. This includes the notorious groundwater contamination underlying Botany in Sydney, an area of rich industrial, residential and cultural significance. The use of microbes to clean up polluted environments, such as the Botany groundwater, is known as bioremediation - a process exploiting the natural metabolic versatility of microbes. To clean up the polluted groundwater in Botany, mixed species communities of pollutant degrading microbes are being produced. Novel tools to reveal the inner workings of these microscopic communities are also being developed, giving Australia an unprecedented advantage in the global bioremediation market.Read moreRead less
Environmental influence on evolutionary processes in bacterial populations. Bacterial populations exhibit remarkable adaptive capabilities in many environmental and medical settings. They respond to environmental stress in terms of altered gene expression, but what are the effects on mutation rates and fitness when cells grow at suboptimal growth rates? We plan to test whether the physiological state of an ancestral population is a determinant of a population's subsequent response to selection. ....Environmental influence on evolutionary processes in bacterial populations. Bacterial populations exhibit remarkable adaptive capabilities in many environmental and medical settings. They respond to environmental stress in terms of altered gene expression, but what are the effects on mutation rates and fitness when cells grow at suboptimal growth rates? We plan to test whether the physiological state of an ancestral population is a determinant of a population's subsequent response to selection. A simple model system using controlled culture conditions will be used to investigate the linkage between environment, mutation rate and fitness under selection. Demonstration of these linkages will have significant impacts on microbiology and understanding evolution.Read moreRead less