Mechanisms of action and expression of bioactive compounds produced by the surface associated marine bacterium Pseudoalteromonas tunicata. The marine surface-associated bacterium Pseudoalteromonas tunicata produces a number of bioactive metabolites that inhibit the colonisation and growth of common fouling organisms such as bacteria, fungi, algae and invertebrate larvae. The antibacterial and antifungal compounds represent novel metabolites active against a remarkable range of both medically and ....Mechanisms of action and expression of bioactive compounds produced by the surface associated marine bacterium Pseudoalteromonas tunicata. The marine surface-associated bacterium Pseudoalteromonas tunicata produces a number of bioactive metabolites that inhibit the colonisation and growth of common fouling organisms such as bacteria, fungi, algae and invertebrate larvae. The antibacterial and antifungal compounds represent novel metabolites active against a remarkable range of both medically and agriculturally important bacteria and fungi. This project aims to explore the identity, mode of action and regulation of expression of these compounds. This research proposal addresses several significant biological concepts and will lead to the development of novel environmentally friendly antifouling and antimicrobial technologies.Read moreRead less
The molecular pathogenesis of Equine rhinitis A virus, a major respiratory pathogen of horses. The equine industry in Australia is worth $15 billion a year. Equine respiratory disease costs Victoria, alone, $5-10 million per year. Equine rhinitis A virus is a major cause of acute febrile respiratory disease in horses. This project aims to develop an infectious clone to study the pathogenesis of the disease, and subunit antigens for use as vaccines. These reagents will increase our understand ....The molecular pathogenesis of Equine rhinitis A virus, a major respiratory pathogen of horses. The equine industry in Australia is worth $15 billion a year. Equine respiratory disease costs Victoria, alone, $5-10 million per year. Equine rhinitis A virus is a major cause of acute febrile respiratory disease in horses. This project aims to develop an infectious clone to study the pathogenesis of the disease, and subunit antigens for use as vaccines. These reagents will increase our understanding of the pathogenesis of ERAV and will lead to experimental vaccines which will be tested in horses.Read moreRead less
Exploring and harnessing mobile DNA: Integrons and gene cassettes in natural populations of Bacteria. Bacteria respond rapidly to environmental change by acquiring new genes via lateral gene transfer. The integron/gene cassette system is important in this process as it is found in an increasingly broad range of bacteria. As well as being common, we have shown that the system is associated with an unprecedented amount of genetic novelty. Here we explore the limits of this novelty and its con ....Exploring and harnessing mobile DNA: Integrons and gene cassettes in natural populations of Bacteria. Bacteria respond rapidly to environmental change by acquiring new genes via lateral gene transfer. The integron/gene cassette system is important in this process as it is found in an increasingly broad range of bacteria. As well as being common, we have shown that the system is associated with an unprecedented amount of genetic novelty. Here we explore the limits of this novelty and its contribution to bacterial evolution. In so doing we have the potential to identify new commercially important genes and develop enabling technologies. These discoveries could produce beneficial outcomes for exploitation by a wide range of Australian industries.Read moreRead less
Genetic manipulation of Clostridium sporogenes. The overall objective of this project is to develop genetic methods for the manipulation of the anaerobic bacterium Clostridium sporogenes. Specifically, the project aims to manipulate this microorganism so that genes encoding enzymes that convert prodrugs to anticancer drugs can be introduced and stably maintained on its chromosome. The significance of the project is that the resultant bacteria, and others constructed using these methods, will th ....Genetic manipulation of Clostridium sporogenes. The overall objective of this project is to develop genetic methods for the manipulation of the anaerobic bacterium Clostridium sporogenes. Specifically, the project aims to manipulate this microorganism so that genes encoding enzymes that convert prodrugs to anticancer drugs can be introduced and stably maintained on its chromosome. The significance of the project is that the resultant bacteria, and others constructed using these methods, will then be able to be tested for their ability to act as specific drug delivery systems for use in the treatment of solid tumours.Read moreRead less
Bacterial mechanisms of gold mobilisation and precipitation with applications to mineral processing and exploration. The development of a comprehensive model for the biogeochemical behaviour of gold in the environment will aid mineral explorers to interpret existing exploration data and to develop better exploration strategies. Moreover, this project aims to develop the basis for a new geomicrobiological gold exploration method by identifying organisms and microbial gene sequences that could be ....Bacterial mechanisms of gold mobilisation and precipitation with applications to mineral processing and exploration. The development of a comprehensive model for the biogeochemical behaviour of gold in the environment will aid mineral explorers to interpret existing exploration data and to develop better exploration strategies. Moreover, this project aims to develop the basis for a new geomicrobiological gold exploration method by identifying organisms and microbial gene sequences that could be used as biomarkers for mineralisation. This research will also provide the fundamental information required to copy nature and engineer new cost-efficient and environmentally friendly technologies for gold processing using microorganisms that occur naturally in Australian soils. Read moreRead less
EXTRACELLULAR ELECTRON TRANSFER IN BIO-ELECTROCHEMICAL SYSTEMS. Water quality and supply are critical issues in Australia. This project investigates the role of bacteria in maintaining a good freshwater quality, and the influence of environmental parameters on this. It will enable us to assess the role of bacteria on greenhouse gas emissions in a variety of environments. As a result, processes can be developed to alleviate high emissions while simultaneously producing green energy. The proteomic ....EXTRACELLULAR ELECTRON TRANSFER IN BIO-ELECTROCHEMICAL SYSTEMS. Water quality and supply are critical issues in Australia. This project investigates the role of bacteria in maintaining a good freshwater quality, and the influence of environmental parameters on this. It will enable us to assess the role of bacteria on greenhouse gas emissions in a variety of environments. As a result, processes can be developed to alleviate high emissions while simultaneously producing green energy. The proteomics study will deliver, aside from knowledge, redox proteins which find their way to diagnostics and fuel cells. This project substantiates Australia based research at the forefront and enables international anchoring of our expertise.Read moreRead less
Kernel methods for the analysis of whole bacterial genomes. This project addresses the fundamental scientific problem of the identification of regulatory regions and specific promoters within bacterial genomes, with a focus upon two organisms of great social, economic and bioterrism significance. From the machine learning perspective, the project will be the first to produce a kernel-based approach directly tailored to the problem of the detection of regulatory regions. The methods developed wil ....Kernel methods for the analysis of whole bacterial genomes. This project addresses the fundamental scientific problem of the identification of regulatory regions and specific promoters within bacterial genomes, with a focus upon two organisms of great social, economic and bioterrism significance. From the machine learning perspective, the project will be the first to produce a kernel-based approach directly tailored to the problem of the detection of regulatory regions. The methods developed will be made available through a straightforward web-based interface, allowing biologists throughout the world to utilize the approach as a tool to be applied to a progressively widening class of bacterial genomes, and even to eukaryotes. Read moreRead less
Enhancement of monopartite geminivirus pathogenicity by satellite DNA beta encoded betaC1 protein: the role of host factors. Australian incursions of geminiviruses are uncontrollable due to their unique mode of spread by whiteflies. The first incursion in Darwin in 1970 has spread to Far Northern Queensland. The second in SE Queensland in 2006 is estimated to cause $500 million loss to horticulture. Our $2 billion cotton industry is threatened by cotton leaf curl diseases from South Asia, where ....Enhancement of monopartite geminivirus pathogenicity by satellite DNA beta encoded betaC1 protein: the role of host factors. Australian incursions of geminiviruses are uncontrollable due to their unique mode of spread by whiteflies. The first incursion in Darwin in 1970 has spread to Far Northern Queensland. The second in SE Queensland in 2006 is estimated to cause $500 million loss to horticulture. Our $2 billion cotton industry is threatened by cotton leaf curl diseases from South Asia, where DNA beta enhances virus replication and disease severity. DNA beta has the potential to enter Australia with several different geminiviruses and to spread into others by co-infection, which requires research on detection and pathogenesis of DNA beta.Read moreRead less