Proteomic analysis of subcellular changes during apoptosis. This project aims to use a novel proteomic approach to examine mechanisms of apoptosis at the level of the plasma membrane, mitochondrion, nucleus and cytosol, screening protein extracts of cell organelles by the new technique of SELDI-TOF mass spectrometry in which proteins are adsorbed onto activated chips. This will provide protein mass profiles characteristic of various stages of apoptosis, and will allow identification of proteins ....Proteomic analysis of subcellular changes during apoptosis. This project aims to use a novel proteomic approach to examine mechanisms of apoptosis at the level of the plasma membrane, mitochondrion, nucleus and cytosol, screening protein extracts of cell organelles by the new technique of SELDI-TOF mass spectrometry in which proteins are adsorbed onto activated chips. This will provide protein mass profiles characteristic of various stages of apoptosis, and will allow identification of proteins of interest by conventional proteomic methods. The establishment of SELDI-MS as a viable tool for cell proteomics would open new opportunities to understand a broad range of cellular functions at the level of protein expression.Read moreRead less
Statistical Advances in the Post-Genome Era. Biologically relevant statistical foundations for post-genome biology and biotechnology will be developed. Specific goals of the topics include the development of accurate and more efficient algorithms for sequence alignments, improved models to maximise the accuracy of analyses for gene expression data and superior statistical methods for identification of complex gene networks that predispose an organism to disease. The Project will make significant ....Statistical Advances in the Post-Genome Era. Biologically relevant statistical foundations for post-genome biology and biotechnology will be developed. Specific goals of the topics include the development of accurate and more efficient algorithms for sequence alignments, improved models to maximise the accuracy of analyses for gene expression data and superior statistical methods for identification of complex gene networks that predispose an organism to disease. The Project will make significant contributions to the new and evolving priority research area of Bioinformation Science (including bioinformatics). Outcomes will include novel techniques for analysis and mining of post-genome data, with applications to developments in Bio-medicine and Bio-agricultureRead moreRead less
Mechanisms of action and expression of bioactive compounds produced by the surface associated marine bacterium Pseudoalteromonas tunicata. The marine surface-associated bacterium Pseudoalteromonas tunicata produces a number of bioactive metabolites that inhibit the colonisation and growth of common fouling organisms such as bacteria, fungi, algae and invertebrate larvae. The antibacterial and antifungal compounds represent novel metabolites active against a remarkable range of both medically and ....Mechanisms of action and expression of bioactive compounds produced by the surface associated marine bacterium Pseudoalteromonas tunicata. The marine surface-associated bacterium Pseudoalteromonas tunicata produces a number of bioactive metabolites that inhibit the colonisation and growth of common fouling organisms such as bacteria, fungi, algae and invertebrate larvae. The antibacterial and antifungal compounds represent novel metabolites active against a remarkable range of both medically and agriculturally important bacteria and fungi. This project aims to explore the identity, mode of action and regulation of expression of these compounds. This research proposal addresses several significant biological concepts and will lead to the development of novel environmentally friendly antifouling and antimicrobial technologies.Read moreRead less
Enabling Technologies for Structural Genomics. New technologies will be developed to save time, money and effort in rapid preparation of protein samples for structural genomics. Systems will be devised for preparing sufficient isotope-labelled proteins for nuclear magnetic resonance spectroscopy without using living organisms, for efficiently identifying points at which proteins can be broken into smaller fragments with the right properties, and for joining the ends of proteins and peptides toge ....Enabling Technologies for Structural Genomics. New technologies will be developed to save time, money and effort in rapid preparation of protein samples for structural genomics. Systems will be devised for preparing sufficient isotope-labelled proteins for nuclear magnetic resonance spectroscopy without using living organisms, for efficiently identifying points at which proteins can be broken into smaller fragments with the right properties, and for joining the ends of proteins and peptides together to make them much more stable. This combination of technologies are widely applicable to current problems in protein chemistry, molecular biology, functional genomics and the medical sciences.Read moreRead less
Molecularly engineered cell-instructive hydrogels for enhanced tissue regeneration. The outcomes of this project will be relevant to range of wounds, including burns, bed-sores, and diabetic and venous ulcers. Clearly, innovation in wound healing is urgently required as the treatment of wounds represents a significant challenge at all levels of our society, in terms of cost (physical, emotional and financial) to patients, the economy and to the wider community. Despite this obvious and overwhelm ....Molecularly engineered cell-instructive hydrogels for enhanced tissue regeneration. The outcomes of this project will be relevant to range of wounds, including burns, bed-sores, and diabetic and venous ulcers. Clearly, innovation in wound healing is urgently required as the treatment of wounds represents a significant challenge at all levels of our society, in terms of cost (physical, emotional and financial) to patients, the economy and to the wider community. Despite this obvious and overwhelming need, research in wound healing is relatively under-developed and has yet to adopt modern biotechnology and biomaterials approaches. This project is therefore directed at generating cost-effective frontier wound dressing technologies that accelerate wound repair.Read moreRead less
Forces on Particles in Flows Traversing a Magnetic Field. The influence of magnetic fields on the motion of particles near surfaces will be examined using quiescent and shear flow fields at low Reynolds numbers. This theoretical and experimental study will produce a precise theoretical understanding of the motion, including the shear induced lift-force, and hence a basis for controlling the interaction of the particle with the adjacent surface. This fundamental study will provide the foundations ....Forces on Particles in Flows Traversing a Magnetic Field. The influence of magnetic fields on the motion of particles near surfaces will be examined using quiescent and shear flow fields at low Reynolds numbers. This theoretical and experimental study will produce a precise theoretical understanding of the motion, including the shear induced lift-force, and hence a basis for controlling the interaction of the particle with the adjacent surface. This fundamental study will provide the foundations needed to apply magnetic fields to a broad range of emerging problems in nano-technology and biotechnology, and help train and educate a student at the PhD level in the area.Read moreRead less
Optimising vascularisation of tissue engineering chambers for construction of robust tissues. We have produced a device that has commercial application in several fields of basic science, biotechnology and bioengineering. When its full potential is achieved, our innovative organ chamber will strengthen Australia's standing in the biotechnology field and enrich specific applications. The knowledge gained from understanding the growth of blood vessels will benefit several fields including chemical ....Optimising vascularisation of tissue engineering chambers for construction of robust tissues. We have produced a device that has commercial application in several fields of basic science, biotechnology and bioengineering. When its full potential is achieved, our innovative organ chamber will strengthen Australia's standing in the biotechnology field and enrich specific applications. The knowledge gained from understanding the growth of blood vessels will benefit several fields including chemical bioengineering, tissue engineering and repair, polymer chemistry, therapeutics in many areas (like cancer, heart disease, diabetes), hormone manufacture for agricultural, veterinary and medical purposes and cosmetics manufacture. The project will train several post-doctoral fellows and PhD students in this cutting edge field of researchRead moreRead less
Discovery and applications of circular proteins. The many national benefits that will flow from this program include (i) new knowledge in plant biochemistry, peptide chemistry and protein engineering protected by a strong intellectual property position that will give Australia a competitive edge in relevant biotechnology applications; (ii) the training of a new generation of skilled researchers to drive a sustainable biotechnology sector in Australia; (iii) economic benefits from royalty returns ....Discovery and applications of circular proteins. The many national benefits that will flow from this program include (i) new knowledge in plant biochemistry, peptide chemistry and protein engineering protected by a strong intellectual property position that will give Australia a competitive edge in relevant biotechnology applications; (ii) the training of a new generation of skilled researchers to drive a sustainable biotechnology sector in Australia; (iii) economic benefits from royalty returns on drugs and agricultural products that will likely arise from the program; (iv) environment benefits due to a reduced need for chemical insecticides; and (v) social benefits due to a reduction in suffering from diseases for which drugs are developed as a result of this program.Read moreRead less
Characteristics of chlorophyll d-binding protein complexes: assembly of light-harvesting complexes. This project will investigate molecular mechanisms of photosynthesis in Chl d with the view to applying our findings in biotechnology and artificial photosynthesis. We will use a variety of molecular biology, proteomics and physical techniques to probe the bonding of Chl d to binding proteins. Synthetic peptide maquettes will provide a model to develop this understanding. Only two chlorophylls (a ....Characteristics of chlorophyll d-binding protein complexes: assembly of light-harvesting complexes. This project will investigate molecular mechanisms of photosynthesis in Chl d with the view to applying our findings in biotechnology and artificial photosynthesis. We will use a variety of molecular biology, proteomics and physical techniques to probe the bonding of Chl d to binding proteins. Synthetic peptide maquettes will provide a model to develop this understanding. Only two chlorophylls (a and d) have so far been found to take part in the primary reactions of photosynthesis. This research will grow our understanding of this pivotal process and underpin future developments in artificial photosynthesis and in the photonics industry.Read moreRead less
The Other Side: Long-distance Feedback and Cross-talk in the Arabidopsis Branching Gene Network. Shoot structure in nearly all plants impacts on water relations, yield and sustainability. Isolation of novel genes and plant hormone pathways that affect shoot structure should allow us to capture IP for Australia and enhance plant improvement and sustainability. One of the pathways we will investigate produces glucosinolates, small plant-specific molecules that have considerable value as anti-cance ....The Other Side: Long-distance Feedback and Cross-talk in the Arabidopsis Branching Gene Network. Shoot structure in nearly all plants impacts on water relations, yield and sustainability. Isolation of novel genes and plant hormone pathways that affect shoot structure should allow us to capture IP for Australia and enhance plant improvement and sustainability. One of the pathways we will investigate produces glucosinolates, small plant-specific molecules that have considerable value as anti-cancer agents in humans. Flavonoids, another pathway regulated in our shoot branching lines, also benefit human health. Graduate students and postdoctoral researchers will gain skills in research management, design, ethics and experimental methods pertinent to the growing biotechnology industry in Australia.Read moreRead less